Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL122125.1-201ENST00000616999 600 ntBASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 AC024884.1-201ENST00000620583 399 ntBASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 Z83820.1-201ENST00000456978 1499 ntBASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 AC245100.2-201ENST00000454544 1679 ntBASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCNB1IP1Q9NPC3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 RN7SKP74-201ENST00000362849 309 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AL096711.1-201ENST00000404780 554 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AL589994.1-201ENST00000404962 340 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 RPL7P56-201ENST00000429441 717 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 RPL19P16-201ENST00000433839 588 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 VN1R110P-201ENST00000438988 971 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 SNRPFP2-201ENST00000440710 251 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC090804.1-201ENST00000448870 490 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 EIF3KP3-201ENST00000514461 639 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 RN7SKP70-201ENST00000516655 271 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 CDC42P3-201ENST00000518493 633 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC006530.1-201ENST00000555980 571 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC067773.1-201ENST00000603284 1094 ntBASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCNB1IP1Q9NPC3 AC112255.1-201ENST00000624070 2493 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 HCFC2P1-201ENST00000392864 1592 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 OR56A4-201ENST00000330728 1209 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 RNA5SP477-201ENST00000362639 119 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 CXADRP1-201ENST00000398098 1095 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 EI24P3-201ENST00000399046 1062 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 OR7E156P-201ENST00000400303 464 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 PPIAP9-201ENST00000403866 498 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 RN7SKP29-201ENST00000410957 272 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 AK4P4-201ENST00000419465 646 ntBASIC5.09□□□□□ -1.59
CCNB1IP1Q9NPC3 GNG5P5-201ENST00000420444 220 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms