Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 RN7SKP6-201ENST00000364795 319 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 FAM96AP1-201ENST00000430879 482 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 PSMD10P3-201ENST00000437000 448 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 SUMO2P1-206ENST00000445436 284 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 RN7SL51P-201ENST00000468230 285 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AP004607.2-201ENST00000533949 322 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 HMGN2P6-201ENST00000551091 273 ntBASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KIAA1549Q9HCM3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RNA5SP319-201ENST00000362768 119 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC009804.1-201ENST00000400949 179 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL389915.2-201ENST00000454576 441 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RN7SL329P-201ENST00000467740 299 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MIR4700-201ENST00000578311 74 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC244107.2-201ENST00000611773 76 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MIR6837-201ENST00000620884 64 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 SNORA70-201ENST00000384436 135 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL645927.1-201ENST00000396783 406 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL133482.1-201ENST00000415988 498 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL354868.1-201ENST00000417077 482 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 EI24P4-201ENST00000423683 1078 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC021876.1-201ENST00000425959 359 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RPL7P56-201ENST00000429441 717 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AL161722.2-201ENST00000434731 981 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC073465.2-201ENST00000440938 498 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 MYO5BP2-201ENST00000449815 1277 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 RPL7P45-201ENST00000455851 743 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC002075.1-201ENST00000457396 676 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC044860.2-201ENST00000561005 179 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AC090527.3-201ENST00000619041 548 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 AP003400.3-201ENST00000624904 346 ntBASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KIAA1549Q9HCM3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 OR9K1P-202ENST00000641111 3217 ntBASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
KIAA1549Q9HCM3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms