Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.04□□□□□ -1.44
USP29Q9HBJ7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.04□□□□□ -1.44
USP29Q9HBJ7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC016745.2-201ENST00000608834 3443 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC138907.8-201ENST00000623981 2256 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 MIR133A2-201ENST00000347538 102 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 RN7SKP186-201ENST00000365371 303 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 LYPLA1P3-201ENST00000402650 695 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 MTATP6P31-201ENST00000406985 692 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 MORF4L1P7-201ENST00000426038 703 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 BMS1P10-201ENST00000443754 1120 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 CST12P-201ENST00000457644 362 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC079080.1-201ENST00000479841 822 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC006539.1-201ENST00000481419 501 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 RPL23AP73-201ENST00000492507 471 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC006499.4-201ENST00000510947 694 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 RNU6-889P-201ENST00000517189 103 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC093510.2-201ENST00000562820 896 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL163952.1-202ENST00000569625 600 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 TXNP4-201ENST00000575018 310 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 MIMT1-201ENST00000597105 1050 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC027243.2-201ENST00000602530 724 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL133481.2-203ENST00000607558 139 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC108673.3-201ENST00000609183 335 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC109309.2-201ENST00000612597 332 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 AC093909.5-201ENST00000621839 1799 ntBASIC6.03□□□□□ -1.44
USP29Q9HBJ7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.03□□□□□ -1.44
USP29Q9HBJ7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
USP29Q9HBJ7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
USP29Q9HBJ7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.02□□□□□ -1.44
USP29Q9HBJ7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 SNORA51.1-201ENST00000363243 140 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 TRIM60P17-201ENST00000415181 719 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 MARK2P12-201ENST00000420129 585 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL035660.1-201ENST00000422041 222 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CRIP1P1-201ENST00000427567 185 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 ELOCP3-201ENST00000439303 348 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 Z99127.2-201ENST00000441426 334 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC007000.2-201ENST00000442564 487 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL606517.1-201ENST00000446914 387 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 HMGN1P5-201ENST00000448591 263 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CLIC4P1-201ENST00000453177 535 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC004129.2-201ENST00000457229 287 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 CABYRP1-201ENST00000465493 1045 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 MTCO2P9-201ENST00000503214 694 ntBASIC6.02□□□□□ -1.45
USP29Q9HBJ7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.02□□□□□ -1.45
USP29Q9HBJ7 SETP21-201ENST00000514799 892 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms