Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AL049779.2-201ENST00000553847 315 ntBASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AL683813.2-201ENST00000605245 502 ntBASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AC018645.2-201ENST00000609151 472 ntBASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AC005899.7-201ENST00000618199 588 ntBASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AP001885.1-201ENST00000621658 558 ntBASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RTFDC1Q9BY42 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 PTGES3P2-201ENST00000407942 482 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 AC005033.1-201ENST00000428904 813 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 OR52B5P-201ENST00000435337 951 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 RPS26P41-201ENST00000450370 284 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 EIF2S2P5-201ENST00000457635 968 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 AC244502.2-201ENST00000543361 851 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 AL390726.5-202ENST00000564800 256 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 ZNF92P2-201ENST00000600543 1059 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 AL139022.2-201ENST00000606934 443 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 AP000943.4-201ENST00000622912 357 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 OR52B5P-202ENST00000641118 1110 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7□□□□□ -1.29
RTFDC1Q9BY42 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 AC245100.2-201ENST00000454544 1679 ntBASIC7□□□□□ -1.29
RTFDC1Q9BY42 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTFDC1Q9BY42 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 RNA5SP514-201ENST00000363717 111 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 RN7SKP28-201ENST00000364770 305 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC016027.5-201ENST00000427227 210 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC009963.4-201ENST00000448535 339 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 MTND6P32-201ENST00000457611 483 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC126177.5-201ENST00000549599 178 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 RN7SL708P-201ENST00000580952 299 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC006116.7-201ENST00000590141 756 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 BMS1P7-201ENST00000602440 1052 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC005021.1-201ENST00000608730 355 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC245389.2-201ENST00000616023 576 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC242843.1-201ENST00000618702 573 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AP006248.3-201ENST00000623580 594 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AL590396.2-201ENST00000636511 1041 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 AC079753.1-201ENST00000623243 3868 ntBASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTFDC1Q9BY42 IMMTP1-201ENST00000435590 2219 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms