Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AL390726.5-202ENST00000564800 256 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 AC099654.11-201ENST00000638857 294 ntBASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RPAP1Q9BWH6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AL137058.3-201ENST00000624531 3099 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 MIR133B-201ENST00000362210 119 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RN7SKP6-201ENST00000364795 319 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AL133270.1-201ENST00000402635 279 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RN7SKP125-201ENST00000410481 302 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RN7SKP213-201ENST00000410746 298 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RN7SKP216-201ENST00000411050 312 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 MRPS21P2-201ENST00000424704 264 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RPL5P25-201ENST00000441148 775 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AURKAPS1-201ENST00000451805 1212 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AL035090.1-201ENST00000454835 332 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 RPL15P21-201ENST00000495592 567 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC072052.1-201ENST00000496556 306 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC105420.1-201ENST00000504389 582 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 OR5AM1P-201ENST00000532136 1032 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 TAS2R6P-201ENST00000605022 826 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC126915.2-201ENST00000610957 190 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AC010632.3-201ENST00000611377 369 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 AP000473.2-201ENST00000602659 1537 ntBASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RPAP1Q9BWH6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC009784.1-201ENST00000426484 460 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC092593.2-201ENST00000513866 913 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 EIF4A2P5-201ENST00000529914 499 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC078878.1-201ENST00000539832 958 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 BLZF2P-201ENST00000553776 1130 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC125494.2-201ENST00000602431 657 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 AC023632.6-201ENST00000624338 2177 ntBASIC6.63□□□□□ -1.35
RPAP1Q9BWH6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 RN7SL188P-201ENST00000469842 285 ntBASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 RPL7AP6-201ENST00000477943 801 ntBASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RPAP1Q9BWH6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms