Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 AC027279.4-201ENST00000624371 2072 ntBASIC5.62□□□□□ -1.51
SNX18Q96RF0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX18Q96RF0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX18Q96RF0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC234772.1-201ENST00000377927 937 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL445238.1-204ENST00000400311 463 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL391422.1-201ENST00000402155 436 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 VIM2P-201ENST00000402383 1294 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL096800.1-201ENST00000405326 893 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 RPL21P50-201ENST00000417698 477 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 BTF3P9-201ENST00000418784 283 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL160175.1-201ENST00000428124 247 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC006484.1-201ENST00000435086 1884 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC092447.2-201ENST00000435487 669 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 FABP5P3-201ENST00000437960 408 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 KRT8P51-201ENST00000438938 274 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 MTCO1P53-201ENST00000441633 699 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 HDAC1P2-201ENST00000453661 1398 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 CBX1P5-201ENST00000475330 559 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 OR7E22P-201ENST00000478335 1035 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC005017.1-201ENST00000482002 490 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 RPS27P20-201ENST00000492051 246 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 KHDC1P1-201ENST00000511053 508 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC091163.3-201ENST00000518269 1144 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 UBTFL10-201ENST00000528532 562 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 TDGP1-201ENST00000543961 1229 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC091515.1-201ENST00000548110 679 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC012321.1-201ENST00000561622 1588 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC010503.3-201ENST00000594355 540 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC084373.1-201ENST00000603311 235 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 DUXAP3-201ENST00000603616 594 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL359715.4-201ENST00000606629 1436 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 RNU4-5P-201ENST00000607255 135 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC006386.1-201ENST00000619436 415 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AP002791.1-201ENST00000623291 381 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC138965.3-201ENST00000623875 498 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC017104.5-201ENST00000637647 639 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC006927.2-201ENST00000639256 389 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX18Q96RF0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 AC022164.1-201ENST00000568767 2673 ntBASIC5.61□□□□□ -1.51
SNX18Q96RF0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX18Q96RF0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
SNX18Q96RF0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX18Q96RF0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX18Q96RF0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms