Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 SDC4P-201ENST00000453285 601 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 FCF1P6-201ENST00000456841 595 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC092905.1-201ENST00000467527 949 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 NPM1P17-201ENST00000479221 602 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 RPL23AP40-201ENST00000487630 390 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 RNA5SP116-201ENST00000516132 98 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 RN7SKP157-201ENST00000516174 282 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 SCARNA6.1-201ENST00000516989 238 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 OR4H6P-201ENST00000563771 921 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 MIR4260-201ENST00000583107 67 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC090330.1-201ENST00000588646 764 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 CU639417.4-201ENST00000623928 207 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 AC007683.2-201ENST00000624681 714 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGB4Q8WW32 MAPK10-261ENST00000641050 3109 ntBASIC5.9□□□□□ -1.46
HMGB4Q8WW32 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 AC116158.1-201ENST00000560231 2129 ntBASIC5.9□□□□□ -1.47
HMGB4Q8WW32 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.9□□□□□ -1.47
HMGB4Q8WW32 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC245100.2-201ENST00000454544 1679 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 U3.7-201ENST00000363668 216 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 MIR105-2-201ENST00000385083 81 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AL391422.1-201ENST00000402155 436 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 RMRPP5-201ENST00000411156 267 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AL596448.1-201ENST00000415024 392 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 BTF3P9-201ENST00000418784 283 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 FMO7P-201ENST00000436045 768 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC023141.8-201ENST00000442554 208 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CYCSP51-201ENST00000443545 318 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 SPRYD7P1-201ENST00000443861 570 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 MOB1AP2-201ENST00000446060 614 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ACA64.4-201ENST00000459070 127 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 RN7SL799P-201ENST00000475891 298 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 LARP7P4-201ENST00000481075 878 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC006539.1-201ENST00000481419 501 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 NPM1P29-201ENST00000483112 803 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 MTND1P6-201ENST00000523621 946 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 UBTFL9-201ENST00000534504 1148 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 MIR1269B-201ENST00000580405 75 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms