Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC073575.2-201ENST00000614212 627 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 CASC19-260ENST00000641828 2001 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 RNU2-50P-201ENST00000410494 143 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 AC092653.1-201ENST00000608509 531 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC005154.2-201ENST00000438110 379 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC239367.2-201ENST00000447309 705 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AP000797.2-201ENST00000475768 606 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC140134.1-201ENST00000511830 3544 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AL591848.1-201ENST00000413092 322 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC007568.1-201ENST00000422912 471 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 HMGN2P25-201ENST00000486956 268 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 RN7SKP253-201ENST00000516424 309 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 OR5M2P-201ENST00000529003 936 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC008147.3-201ENST00000548666 354 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 HSPD1P7-201ENST00000447985 1686 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AL132640.2-201ENST00000559968 1698 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC140479.2-201ENST00000421567 3130 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 ZNF969P-201ENST00000510345 2341 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 TXNP5-201ENST00000441043 315 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 RBMY2TP-201ENST00000451162 947 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC011005.3-201ENST00000491624 395 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC021106.1-201ENST00000509020 1058 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC109464.1-201ENST00000511091 819 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 AL163952.1-202ENST00000569625 600 ntBASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ALMS1Q8TCU4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 CENPIP1-201ENST00000425713 902 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AP001781.1-201ENST00000530977 207 ntBASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ALMS1Q8TCU4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms