Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 AC009248.2-201ENST00000619826 254 ntBASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 PISRT1-201ENST00000626175 531 ntBASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 AC100810.3-201ENST00000633189 2240 ntBASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 AC021242.1-201ENST00000507315 2035 ntBASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.07□□□□□ -1.12
SCUBE3Q8IX30 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 RLIMP2-201ENST00000427891 1563 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 BRD7P1-201ENST00000557705 1915 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL139327.1-201ENST00000382988 348 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL161909.1-201ENST00000397390 712 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 TXNP7-201ENST00000406296 293 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 IFNA12P-201ENST00000413147 571 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 MTCO3P46-201ENST00000425787 232 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 DDX11L10-201ENST00000430178 571 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 CR391992.1-201ENST00000438601 394 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC123904.1-201ENST00000441072 368 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL590365.1-201ENST00000450788 243 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 SUMO1P2-201ENST00000452524 304 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 RPS29P5-201ENST00000452777 171 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 RN7SL55P-201ENST00000464534 297 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC073522.1-201ENST00000483312 377 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC127024.1-201ENST00000490847 418 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 SUMO2P17-201ENST00000504438 285 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 Y_RNA.711-201ENST00000516993 102 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AP001994.1-201ENST00000527539 826 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 HNRNPCP8-201ENST00000528764 888 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC018630.1-201ENST00000541376 925 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 NUTF2P2-201ENST00000551207 384 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 MIR3149-201ENST00000584629 83 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 THAP12P7-201ENST00000520248 2290 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 AL161891.1-201ENST00000621575 4636 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 LINC02035-201ENST00000610128 5476 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 OR52K3P-202ENST00000641797 1729 ntBASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
SCUBE3Q8IX30 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 AC127502.2-201ENST00000602663 2351 ntBASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCUBE3Q8IX30 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms