Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CHEK2P5-201ENST00000423877 246 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.9□□□□□ -1.63
H3F3AP84243 NPM1P18-201ENST00000434232 732 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC012075.1-201ENST00000436549 580 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.9□□□□□ -1.63
H3F3AP84243 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AL035090.1-201ENST00000454835 332 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.9□□□□□ -1.63
H3F3AP84243 RN7SL101P-201ENST00000496350 279 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC090638.1-201ENST00000498296 909 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.9□□□□□ -1.63
H3F3AP84243 SEPT10P1-201ENST00000517342 1162 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 IGLVIV-64-201ENST00000518581 301 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC020937.1-201ENST00000519677 1013 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.9□□□□□ -1.63
H3F3AP84243 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.9□□□□□ -1.63
H3F3AP84243 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.9□□□□□ -1.63
H3F3AP84243 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC078878.1-201ENST00000539832 958 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.9□□□□□ -1.63
H3F3AP84243 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.9□□□□□ -1.63
H3F3AP84243 AC073869.8-201ENST00000641806 335 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H3F3AP84243 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H3F3AP84243 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
H3F3AP84243 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H3F3AP84243 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
H3F3AP84243 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H3F3AP84243 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC002525.1-201ENST00000624392 1622 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.9□□□□□ -1.63
H3F3AP84243 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.89□□□□□ -1.63
H3F3AP84243 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
H3F3AP84243 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 AL137058.3-201ENST00000624531 3099 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
H3F3AP84243 RNA5SP435-201ENST00000364044 108 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 RNA5SP242-201ENST00000364171 118 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 U3.28-201ENST00000391249 210 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 SNORA11.3-201ENST00000408471 128 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 RN7SKP206-201ENST00000410823 293 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.89□□□□□ -1.63
H3F3AP84243 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 RPL12P17-201ENST00000432393 498 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 RPL12P18-201ENST00000437175 325 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.89□□□□□ -1.63
H3F3AP84243 AL672138.1-201ENST00000450604 1015 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 RANP1-206ENST00000455094 651 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 RPL35AP19-201ENST00000469425 329 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AC104109.1-201ENST00000498563 436 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.89□□□□□ -1.63
H3F3AP84243 AC079064.1-201ENST00000528365 362 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 AC012146.2-201ENST00000576545 416 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.89□□□□□ -1.63
H3F3AP84243 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.89□□□□□ -1.63
H3F3AP84243 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 SNORA11.6-201ENST00000619030 128 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 uc_338.7-201ENST00000621834 124 ntBASIC4.89□□□□□ -1.63
H3F3AP84243 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
H3F3AP84243 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3AP84243 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3AP84243 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3AP84243 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3AP84243 MIR323A-201ENST00000362199 86 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 RNA5SP319-201ENST00000362768 119 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms