Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 THAP12P9-201ENST00000503971 2360 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CL1P78423 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 RNU6-252P-201ENST00000363232 107 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CX3CL1P78423 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL035405.1-201ENST00000400795 710 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 SNRPEP6-201ENST00000407465 277 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL445213.1-201ENST00000412589 747 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL158050.1-201ENST00000416077 457 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 NIFKP3-201ENST00000417799 865 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL160175.1-201ENST00000428124 247 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 PNKDP1-201ENST00000435914 430 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 RBPJP7-201ENST00000442803 1447 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 MTCYBP21-201ENST00000443300 1113 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC023512.1-201ENST00000444513 499 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 GXYLT1P1-201ENST00000446657 490 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 RBPJP5-201ENST00000449433 1447 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 GNL2P1-201ENST00000451274 2190 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LDHBP2-201ENST00000456969 1005 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC092865.4-201ENST00000477936 615 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 SYT14P1-201ENST00000481459 721 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 CDH12P2-201ENST00000504393 298 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC093225.1-201ENST00000506867 1408 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 RNU6-1308P-201ENST00000516817 103 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC008627.1-201ENST00000517511 1704 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 MTCO1P4-201ENST00000520516 1409 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC139697.1-201ENST00000548429 745 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC026826.3-201ENST00000561747 158 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC005034.4-201ENST00000603612 899 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC079880.2-201ENST00000603790 1213 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC034236.3-201ENST00000605999 461 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC018645.2-201ENST00000609151 472 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AL391834.1-201ENST00000609609 560 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 AC092266.1-201ENST00000610958 165 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 uc_338.26-201ENST00000612659 160 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 MIR7109-201ENST00000613748 65 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AL356274.1-201ENST00000617064 410 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC010872.1-201ENST00000624225 675 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 AC073592.6-201ENST00000624271 415 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL590396.2-201ENST00000636511 1041 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.76□□□□□ -1.65
CX3CL1P78423 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 ADAM24P-201ENST00000398655 2101 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CX3CL1P78423 AL354854.1-201ENST00000455940 1363 ntBASIC4.76□□□□□ -1.65
CX3CL1P78423 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.76□□□□□ -1.65
CX3CL1P78423 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms