Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM4P67936 AC104966.1-201ENST00000467010 1464 ntBASIC6.02□□□□□ -1.45
TPM4P67936 ZNF652P1-201ENST00000442420 1309 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AL731566.1-201ENST00000620490 1937 ntBASIC6.01□□□□□ -1.45
TPM4P67936 SMG1P7-201ENST00000565246 2704 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AP001642.1-201ENST00000624727 2117 ntBASIC6.01□□□□□ -1.45
TPM4P67936 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TPM4P67936 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM4P67936 RN7SKP6-201ENST00000364795 319 ntBASIC6.01□□□□□ -1.45
TPM4P67936 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM4P67936 RN7SKP97-201ENST00000410966 333 ntBASIC6.01□□□□□ -1.45
TPM4P67936 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM4P67936 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.01□□□□□ -1.45
TPM4P67936 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.01□□□□□ -1.45
TPM4P67936 KF459542.1-201ENST00000450908 553 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AC092754.1-201ENST00000472975 479 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AC093827.1-201ENST00000480094 861 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.01□□□□□ -1.45
TPM4P67936 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM4P67936 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.01□□□□□ -1.45
TPM4P67936 AC116917.1-201ENST00000520558 305 ntBASIC6.01□□□□□ -1.45
TPM4P67936 AP000648.1-201ENST00000529682 397 ntBASIC6.01□□□□□ -1.45
TPM4P67936 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM4P67936 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.01□□□□□ -1.45
TPM4P67936 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.01□□□□□ -1.45
TPM4P67936 AL031601.1-201ENST00000605702 394 ntBASIC6.01□□□□□ -1.45
TPM4P67936 MIR6774-201ENST00000614651 70 ntBASIC6.01□□□□□ -1.45
TPM4P67936 MIR6839-201ENST00000620425 113 ntBASIC6.01□□□□□ -1.45
TPM4P67936 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM4P67936 OR8G3P-202ENST00000641572 1255 ntBASIC6.01□□□□□ -1.45
TPM4P67936 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.01□□□□□ -1.45
TPM4P67936 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM4P67936 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.01□□□□□ -1.45
TPM4P67936 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TPM4P67936 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
TPM4P67936 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6□□□□□ -1.45
TPM4P67936 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6□□□□□ -1.45
TPM4P67936 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6□□□□□ -1.45
TPM4P67936 OOSP1-201ENST00000398992 1270 ntBASIC6□□□□□ -1.45
TPM4P67936 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6□□□□□ -1.45
TPM4P67936 XIST-201ENST00000416330 750 ntTSL 2 BASIC6□□□□□ -1.45
TPM4P67936 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6□□□□□ -1.45
TPM4P67936 AL161722.1-201ENST00000446972 1032 ntBASIC6□□□□□ -1.45
TPM4P67936 ACA64.1-201ENST00000459171 127 ntBASIC6□□□□□ -1.45
TPM4P67936 RNA5SP103-201ENST00000459503 118 ntBASIC6□□□□□ -1.45
TPM4P67936 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6□□□□□ -1.45
TPM4P67936 MTND6P2-201ENST00000512226 524 ntBASIC6□□□□□ -1.45
TPM4P67936 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6□□□□□ -1.45
TPM4P67936 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6□□□□□ -1.45
TPM4P67936 AC116158.1-201ENST00000560231 2129 ntBASIC6□□□□□ -1.45
TPM4P67936 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 AC002310.3-201ENST00000569728 723 ntBASIC6□□□□□ -1.45
TPM4P67936 DPRXP4-201ENST00000578053 568 ntBASIC6□□□□□ -1.45
TPM4P67936 AC107993.1-201ENST00000591343 684 ntBASIC6□□□□□ -1.45
TPM4P67936 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6□□□□□ -1.45
TPM4P67936 AP000769.2-201ENST00000602344 396 ntBASIC6□□□□□ -1.45
TPM4P67936 AP003400.3-201ENST00000624904 346 ntBASIC6□□□□□ -1.45
TPM4P67936 AC087565.3-203ENST00000641018 837 ntBASIC6□□□□□ -1.45
TPM4P67936 CASC19-274ENST00000642018 970 ntBASIC6□□□□□ -1.45
TPM4P67936 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6□□□□□ -1.45
TPM4P67936 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6□□□□□ -1.45
TPM4P67936 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM4P67936 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6□□□□□ -1.45
TPM4P67936 AL731532.2-201ENST00000623542 1953 ntBASIC6□□□□□ -1.45
TPM4P67936 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6□□□□□ -1.45
TPM4P67936 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC000374.1-201ENST00000434698 1745 ntBASIC5.99□□□□□ -1.45
TPM4P67936 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.99□□□□□ -1.45
TPM4P67936 AC004817.4-201ENST00000602396 3625 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 AC007738.1-201ENST00000413892 348 ntBASIC5.99□□□□□ -1.45
TPM4P67936 FAM183DP-201ENST00000421987 399 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AL035660.1-201ENST00000422041 222 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC113412.1-201ENST00000425840 504 ntBASIC5.99□□□□□ -1.45
TPM4P67936 RPL34P6-201ENST00000432390 345 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC068491.1-201ENST00000449539 1241 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms