Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC018809.2-201ENST00000602436 3823 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 COX6B1P3-201ENST00000312310 260 ntBASIC4.77□□□□□ -1.65
ACTBP60709 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 AC017079.1-201ENST00000333650 415 ntBASIC4.77□□□□□ -1.65
ACTBP60709 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTBP60709 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
ACTBP60709 RPL35AP3-201ENST00000414680 288 ntBASIC4.77□□□□□ -1.65
ACTBP60709 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ACTBP60709 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 TUBB4BP6-201ENST00000437576 479 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTBP60709 AC005077.1-201ENST00000449226 375 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC068491.1-201ENST00000449539 1241 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC023194.2-201ENST00000465398 406 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC023424.1-201ENST00000496058 459 ntBASIC4.77□□□□□ -1.65
ACTBP60709 RBBP4P1-201ENST00000502424 1276 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AC016559.2-201ENST00000510759 359 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC091912.1-201ENST00000511351 248 ntBASIC4.77□□□□□ -1.65
ACTBP60709 RNU6-513P-201ENST00000516104 104 ntBASIC4.77□□□□□ -1.65
ACTBP60709 CDC42P3-201ENST00000518493 633 ntBASIC4.77□□□□□ -1.65
ACTBP60709 IGKV3D-25-201ENST00000519599 235 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTBP60709 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.77□□□□□ -1.65
ACTBP60709 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AC006349.1-201ENST00000555526 235 ntBASIC4.77□□□□□ -1.65
ACTBP60709 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
ACTBP60709 AC040958.1-201ENST00000561102 201 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 MTCYBP13-201ENST00000578634 1093 ntBASIC4.77□□□□□ -1.65
ACTBP60709 AP005119.1-201ENST00000580956 292 ntBASIC4.77□□□□□ -1.65
ACTBP60709 MIR4260-201ENST00000583107 67 ntBASIC4.77□□□□□ -1.65
ACTBP60709 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
ACTBP60709 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTBP60709 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTBP60709 AC027088.4-201ENST00000611559 1947 ntBASIC4.77□□□□□ -1.65
ACTBP60709 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTBP60709 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ACTBP60709 QRSL1P1-201ENST00000400977 1540 ntBASIC4.77□□□□□ -1.65
ACTBP60709 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 TCP1P3-201ENST00000414406 1498 ntBASIC4.76□□□□□ -1.65
ACTBP60709 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 ADAM5-202ENST00000399789 1942 ntBASIC4.76□□□□□ -1.65
ACTBP60709 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 AC007618.1-201ENST00000366455 732 ntBASIC4.76□□□□□ -1.65
ACTBP60709 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ACTBP60709 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ACTBP60709 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 PPIAP9-201ENST00000403866 498 ntBASIC4.76□□□□□ -1.65
ACTBP60709 OR13Z1P-201ENST00000416141 834 ntBASIC4.76□□□□□ -1.65
ACTBP60709 NIFKP3-201ENST00000417799 865 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.76□□□□□ -1.65
ACTBP60709 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.76□□□□□ -1.65
ACTBP60709 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.76□□□□□ -1.65
ACTBP60709 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ACTBP60709 RPL19P16-201ENST00000433839 588 ntBASIC4.76□□□□□ -1.65
ACTBP60709 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTBP60709 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.76□□□□□ -1.65
ACTBP60709 AMYP1-201ENST00000440059 1023 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 CFL1P4-201ENST00000451536 498 ntBASIC4.76□□□□□ -1.65
ACTBP60709 PPIAP27-201ENST00000453800 265 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.76□□□□□ -1.65
ACTBP60709 CTSLP6-201ENST00000458273 1002 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
ACTBP60709 RN7SL269P-201ENST00000467795 305 ntBASIC4.76□□□□□ -1.65
ACTBP60709 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.76□□□□□ -1.65
ACTBP60709 UBFD1P1-201ENST00000473259 814 ntBASIC4.76□□□□□ -1.65
ACTBP60709 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 AC020779.1-201ENST00000478757 796 ntBASIC4.76□□□□□ -1.65
ACTBP60709 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.76□□□□□ -1.65
ACTBP60709 RN7SL591P-201ENST00000496150 292 ntBASIC4.76□□□□□ -1.65
ACTBP60709 MYL12BP2-201ENST00000503948 512 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AC021106.1-201ENST00000509020 1058 ntBASIC4.76□□□□□ -1.65
ACTBP60709 LDHAP1-201ENST00000509421 992 ntBASIC4.76□□□□□ -1.65
ACTBP60709 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.76□□□□□ -1.65
ACTBP60709 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.76□□□□□ -1.65
ACTBP60709 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.76□□□□□ -1.65
ACTBP60709 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ACTBP60709 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms