Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC002456.2-201ENST00000509356 380 ntBASIC9.14□□□□□ -0.95
ATN1P54259 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 RNA5SP92-201ENST00000516437 110 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 NARSP2-201ENST00000518524 679 ntBASIC9.14□□□□□ -0.95
ATN1P54259 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 AC138356.2-201ENST00000521192 667 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC9.14□□□□□ -0.95
ATN1P54259 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 AP001804.3-201ENST00000525146 880 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AP003072.2-201ENST00000527756 676 ntBASIC9.14□□□□□ -0.95
ATN1P54259 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC9.14□□□□□ -0.95
ATN1P54259 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 AL137190.1-201ENST00000603288 282 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 AC009779.6-201ENST00000603972 165 ntBASIC9.14□□□□□ -0.95
ATN1P54259 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 AC069499.2-201ENST00000610665 382 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 MIR6745-201ENST00000612694 127 ntBASIC9.14□□□□□ -0.95
ATN1P54259 EIF3FP1-201ENST00000613970 806 ntBASIC9.14□□□□□ -0.95
ATN1P54259 AC130324.3-201ENST00000614165 542 ntBASIC9.14□□□□□ -0.95
ATN1P54259 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 AC133552.3-201ENST00000572236 1869 ntBASIC9.14□□□□□ -0.95
ATN1P54259 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC9.14□□□□□ -0.95
ATN1P54259 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.14□□□□□ -0.95
ATN1P54259 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
ATN1P54259 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 NCAPD2P1-201ENST00000432906 1801 ntBASIC9.14□□□□□ -0.95
ATN1P54259 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ATN1P54259 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 ERCC6-202ENST00000374127 1782 ntBASIC9.14□□□□□ -0.95
ATN1P54259 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
ATN1P54259 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC9.14□□□□□ -0.95
ATN1P54259 KYNUP1-201ENST00000466683 1406 ntBASIC9.14□□□□□ -0.95
ATN1P54259 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
ATN1P54259 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ATN1P54259 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC9.13□□□□□ -0.95
ATN1P54259 AC011297.1-201ENST00000620503 2110 ntBASIC9.13□□□□□ -0.95
ATN1P54259 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC9.13□□□□□ -0.95
ATN1P54259 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 RNU6-823P-201ENST00000391042 103 ntBASIC9.13□□□□□ -0.95
ATN1P54259 RPS27-202ENST00000392558 625 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 RNU6-77P-201ENST00000410554 91 ntBASIC9.13□□□□□ -0.95
ATN1P54259 RN7SKP251-201ENST00000410830 314 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC108032.1-201ENST00000416706 207 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ATN1P54259 AC093155.2-201ENST00000420734 937 ntBASIC9.13□□□□□ -0.95
ATN1P54259 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC9.13□□□□□ -0.95
ATN1P54259 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.13□□□□□ -0.95
ATN1P54259 RGS17P1-201ENST00000423358 553 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AL133396.1-201ENST00000432048 687 ntBASIC9.13□□□□□ -0.95
ATN1P54259 RPL12P15-201ENST00000433385 499 ntBASIC9.13□□□□□ -0.95
ATN1P54259 CYP2C56P-201ENST00000440076 291 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AL356010.1-201ENST00000456364 102 ntBASIC9.13□□□□□ -0.95
ATN1P54259 HNRNPDLP3-201ENST00000456745 380 ntBASIC9.13□□□□□ -0.95
ATN1P54259 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC9.13□□□□□ -0.95
ATN1P54259 AC112184.1-201ENST00000505179 312 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
ATN1P54259 AC008638.1-201ENST00000506035 866 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC106774.2-201ENST00000510266 406 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC117383.2-201ENST00000514722 322 ntBASIC9.13□□□□□ -0.95
ATN1P54259 RNU6-566P-201ENST00000516790 107 ntBASIC9.13□□□□□ -0.95
ATN1P54259 IGHVII-26-2-201ENST00000518751 325 ntBASIC9.13□□□□□ -0.95
ATN1P54259 OR4R1P-201ENST00000529879 463 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC9.13□□□□□ -0.95
ATN1P54259 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.13□□□□□ -0.95
ATN1P54259 AL132640.2-202ENST00000559732 614 ntBASIC9.13□□□□□ -0.95
ATN1P54259 MIR4790-201ENST00000577799 79 ntBASIC9.13□□□□□ -0.95
ATN1P54259 MIR3167-201ENST00000579623 85 ntBASIC9.13□□□□□ -0.95
ATN1P54259 AC139085.1-201ENST00000582716 182 ntBASIC9.13□□□□□ -0.95
ATN1P54259 MIR3942-201ENST00000585264 109 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms