Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 OR7E128P-201ENST00000532736 1024 ntBASIC6.53□□□□□ -1.36
NUP98P52948 AC018552.1-201ENST00000562099 811 ntBASIC6.53□□□□□ -1.36
NUP98P52948 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 AP005131.7-201ENST00000610087 611 ntBASIC6.53□□□□□ -1.36
NUP98P52948 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 AC079168.1-201ENST00000458741 345 ntBASIC6.53□□□□□ -1.36
NUP98P52948 GAPDHP56-201ENST00000506031 988 ntBASIC6.53□□□□□ -1.36
NUP98P52948 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 MEMO1P5-201ENST00000604810 406 ntBASIC6.53□□□□□ -1.36
NUP98P52948 AC005084.1-201ENST00000605160 304 ntBASIC6.53□□□□□ -1.36
NUP98P52948 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.53□□□□□ -1.36
NUP98P52948 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.52□□□□□ -1.36
NUP98P52948 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.52□□□□□ -1.37
NUP98P52948 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.52□□□□□ -1.37
NUP98P52948 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.52□□□□□ -1.37
NUP98P52948 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NUP98P52948 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NUP98P52948 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 GAPDHP15-201ENST00000398586 975 ntBASIC6.52□□□□□ -1.37
NUP98P52948 CHMP1B2P-201ENST00000399581 597 ntBASIC6.52□□□□□ -1.37
NUP98P52948 FABP12P1-201ENST00000401911 322 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AP002530.1-201ENST00000405705 684 ntBASIC6.52□□□□□ -1.37
NUP98P52948 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.52□□□□□ -1.37
NUP98P52948 RPS29P10-201ENST00000439197 166 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.52□□□□□ -1.37
NUP98P52948 OR7E125P-201ENST00000443450 846 ntBASIC6.52□□□□□ -1.37
NUP98P52948 RPS29P22-201ENST00000472363 168 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AP000797.2-201ENST00000475768 606 ntBASIC6.52□□□□□ -1.37
NUP98P52948 HMGN1P9-201ENST00000515212 298 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.52□□□□□ -1.37
NUP98P52948 GCSHP4-201ENST00000538792 439 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AP001267.4-201ENST00000602598 545 ntBASIC6.52□□□□□ -1.37
NUP98P52948 AC098935.2-201ENST00000604222 466 ntBASIC6.52□□□□□ -1.37
NUP98P52948 BX284613.1-201ENST00000452221 1641 ntBASIC6.52□□□□□ -1.37
NUP98P52948 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NUP98P52948 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.52□□□□□ -1.37
NUP98P52948 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NUP98P52948 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NUP98P52948 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NUP98P52948 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NUP98P52948 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.51□□□□□ -1.37
NUP98P52948 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 AL590399.4-201ENST00000436561 601 ntBASIC6.51□□□□□ -1.37
NUP98P52948 AC006466.1-201ENST00000438721 289 ntBASIC6.51□□□□□ -1.37
NUP98P52948 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.51□□□□□ -1.37
NUP98P52948 RBMY2TP-201ENST00000451162 947 ntBASIC6.51□□□□□ -1.37
NUP98P52948 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.51□□□□□ -1.37
NUP98P52948 HIGD1AP5-201ENST00000529959 259 ntBASIC6.51□□□□□ -1.37
NUP98P52948 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.51□□□□□ -1.37
NUP98P52948 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.51□□□□□ -1.37
NUP98P52948 MIR6133-201ENST00000617057 108 ntBASIC6.51□□□□□ -1.37
NUP98P52948 MIR7641-1-201ENST00000627518 61 ntBASIC6.51□□□□□ -1.37
NUP98P52948 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NUP98P52948 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NUP98P52948 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.51□□□□□ -1.37
NUP98P52948 MIPEPP2-201ENST00000422560 1819 ntBASIC6.51□□□□□ -1.37
NUP98P52948 AL359955.1-201ENST00000455242 3275 ntBASIC6.51□□□□□ -1.37
NUP98P52948 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NUP98P52948 MIR141-201ENST00000384975 95 ntBASIC6.5□□□□□ -1.37
NUP98P52948 OR8V1P-201ENST00000395193 873 ntBASIC6.5□□□□□ -1.37
NUP98P52948 RPL10P10-201ENST00000403509 664 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms