Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 MIR4310-201ENST00000582950 57 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 AC008507.3-201ENST00000585753 472 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC018618.2-201ENST00000604770 446 ntBASIC6.24□□□□□ -1.41
NEK3P51956 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 SNORA11.6-201ENST00000619030 128 ntBASIC6.24□□□□□ -1.41
NEK3P51956 AC006840.1-201ENST00000623069 542 ntBASIC6.24□□□□□ -1.41
NEK3P51956 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NEK3P51956 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.24□□□□□ -1.41
NEK3P51956 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NEK3P51956 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NEK3P51956 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEK3P51956 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.24□□□□□ -1.41
NEK3P51956 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
NEK3P51956 AC093775.1-201ENST00000624154 1868 ntBASIC6.24□□□□□ -1.41
NEK3P51956 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NEK3P51956 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NEK3P51956 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AC079753.1-201ENST00000623243 3868 ntBASIC6.23□□□□□ -1.41
NEK3P51956 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 RNU6-225P-201ENST00000384613 103 ntBASIC6.23□□□□□ -1.41
NEK3P51956 RNU6-1257P-201ENST00000384625 110 ntBASIC6.23□□□□□ -1.41
NEK3P51956 RNU11-201ENST00000387069 134 ntBASIC6.23□□□□□ -1.41
NEK3P51956 RNU6-796P-201ENST00000391086 107 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 RPL12P16-201ENST00000431098 498 ntBASIC6.23□□□□□ -1.41
NEK3P51956 MTCO1P43-201ENST00000431831 488 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 USP24P1-201ENST00000433802 779 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AC023141.3-201ENST00000436698 278 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AL353662.1-201ENST00000439099 327 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 NDUFA5P5-201ENST00000468361 342 ntBASIC6.23□□□□□ -1.41
NEK3P51956 CYCSP20-201ENST00000473154 315 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AP003355.1-201ENST00000518956 587 ntBASIC6.23□□□□□ -1.41
NEK3P51956 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.23□□□□□ -1.41
NEK3P51956 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AL360012.1-201ENST00000602813 131 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AL138895.2-201ENST00000603019 178 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AC011374.2-201ENST00000607135 526 ntBASIC6.23□□□□□ -1.41
NEK3P51956 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.23□□□□□ -1.41
NEK3P51956 AC022400.9-201ENST00000623633 273 ntBASIC6.23□□□□□ -1.41
NEK3P51956 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 AC083865.1-201ENST00000636634 831 ntBASIC6.23□□□□□ -1.41
NEK3P51956 SAMMSON-209ENST00000641222 1100 ntBASIC6.23□□□□□ -1.41
NEK3P51956 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
NEK3P51956 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NEK3P51956 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.23□□□□□ -1.41
NEK3P51956 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NEK3P51956 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AL354854.1-201ENST00000455940 1363 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
NEK3P51956 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NEK3P51956 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 RNU1-134P-201ENST00000362935 165 ntBASIC6.22□□□□□ -1.41
NEK3P51956 SNORA43.1-201ENST00000364863 140 ntBASIC6.22□□□□□ -1.41
NEK3P51956 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NEK3P51956 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms