Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.88□□□□□ -1.63
SRP9P49458 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SRP9P49458 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRP9P49458 OR4F13P-202ENST00000560066 2054 ntBASIC4.88□□□□□ -1.63
SRP9P49458 AC079097.1-201ENST00000512187 1399 ntBASIC4.88□□□□□ -1.63
SRP9P49458 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.88□□□□□ -1.63
SRP9P49458 AC083899.1-201ENST00000454465 3819 ntBASIC4.88□□□□□ -1.63
SRP9P49458 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SRP9P49458 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SRP9P49458 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 RNA5SP284-201ENST00000384547 118 ntBASIC4.87□□□□□ -1.63
SRP9P49458 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SRP9P49458 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
SRP9P49458 AC079807.1-201ENST00000429993 481 ntBASIC4.87□□□□□ -1.63
SRP9P49458 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 HMGB3P24-201ENST00000433260 622 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.87□□□□□ -1.63
SRP9P49458 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.87□□□□□ -1.63
SRP9P49458 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 DUTP1-201ENST00000493631 470 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AC109481.1-201ENST00000509173 282 ntBASIC4.87□□□□□ -1.63
SRP9P49458 IGLV3-24-201ENST00000517477 197 ntBASIC4.87□□□□□ -1.63
SRP9P49458 CYCSP22-201ENST00000517555 339 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AC139365.2-201ENST00000517972 253 ntBASIC4.87□□□□□ -1.63
SRP9P49458 OR8A2P-201ENST00000528631 952 ntBASIC4.87□□□□□ -1.63
SRP9P49458 HMGB1P42-201ENST00000532126 553 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AC090888.3-201ENST00000558917 509 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AC096996.1-201ENST00000563813 325 ntBASIC4.87□□□□□ -1.63
SRP9P49458 MIR7853-201ENST00000584820 132 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.87□□□□□ -1.63
SRP9P49458 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.87□□□□□ -1.63
SRP9P49458 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 BTBD10P1-201ENST00000549824 1352 ntBASIC4.87□□□□□ -1.63
SRP9P49458 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SRP9P49458 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRP9P49458 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SRP9P49458 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SRP9P49458 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.86□□□□□ -1.63
SRP9P49458 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
SRP9P49458 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRP9P49458 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.86□□□□□ -1.63
SRP9P49458 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SRP9P49458 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 LYPLA1P3-201ENST00000402650 695 ntBASIC4.86□□□□□ -1.63
SRP9P49458 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.86□□□□□ -1.63
SRP9P49458 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 RPL12P11-201ENST00000439970 501 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.86□□□□□ -1.63
SRP9P49458 AL591623.2-201ENST00000449978 222 ntBASIC4.86□□□□□ -1.63
SRP9P49458 OR52E3P-201ENST00000452083 936 ntBASIC4.86□□□□□ -1.63
SRP9P49458 LRRC37A14P-201ENST00000452297 462 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AC007998.1-201ENST00000474156 672 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AC087672.1-201ENST00000479876 766 ntBASIC4.86□□□□□ -1.63
SRP9P49458 RPL32P33-201ENST00000487023 394 ntBASIC4.86□□□□□ -1.63
SRP9P49458 COX6B1P2-201ENST00000489624 230 ntBASIC4.86□□□□□ -1.63
SRP9P49458 ENPP7P11-201ENST00000505915 627 ntBASIC4.86□□□□□ -1.63
SRP9P49458 SNORD46.2-201ENST00000516021 102 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AC092709.1-201ENST00000521355 1045 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AC122688.1-201ENST00000541494 223 ntBASIC4.86□□□□□ -1.63
SRP9P49458 NMNAT1P5-201ENST00000559657 841 ntBASIC4.86□□□□□ -1.63
SRP9P49458 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.86□□□□□ -1.63
SRP9P49458 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 AC015802.2-201ENST00000589690 189 ntBASIC4.86□□□□□ -1.63
SRP9P49458 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.86□□□□□ -1.63
SRP9P49458 RNU6-84P-201ENST00000607737 102 ntBASIC4.86□□□□□ -1.63
SRP9P49458 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.86□□□□□ -1.63
SRP9P49458 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.86□□□□□ -1.63
SRP9P49458 AC022919.1-201ENST00000624979 626 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms