Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.08□□□□□ -1.44
USP8P40818 AC107958.1-201ENST00000556576 290 ntBASIC6.08□□□□□ -1.44
USP8P40818 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.08□□□□□ -1.44
USP8P40818 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.08□□□□□ -1.44
USP8P40818 AL031601.1-201ENST00000605702 394 ntBASIC6.08□□□□□ -1.44
USP8P40818 AC006213.4-201ENST00000616184 634 ntBASIC6.08□□□□□ -1.44
USP8P40818 AL390318.1-201ENST00000624564 687 ntBASIC6.08□□□□□ -1.44
USP8P40818 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 AC087565.3-203ENST00000641018 837 ntBASIC6.08□□□□□ -1.44
USP8P40818 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP8P40818 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
USP8P40818 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP8P40818 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP8P40818 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 AL121886.1-201ENST00000358609 435 ntBASIC6.07□□□□□ -1.44
USP8P40818 SNORA64.1-201ENST00000362600 132 ntBASIC6.07□□□□□ -1.44
USP8P40818 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 NPM1P40-201ENST00000412758 733 ntBASIC6.07□□□□□ -1.44
USP8P40818 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.07□□□□□ -1.44
USP8P40818 AC007386.1-201ENST00000455212 582 ntBASIC6.07□□□□□ -1.44
USP8P40818 OR7L1P-201ENST00000456181 380 ntBASIC6.07□□□□□ -1.44
USP8P40818 NENFP3-201ENST00000503735 313 ntBASIC6.07□□□□□ -1.44
USP8P40818 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.07□□□□□ -1.44
USP8P40818 RNA5SP271-201ENST00000516700 88 ntBASIC6.07□□□□□ -1.44
USP8P40818 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.07□□□□□ -1.44
USP8P40818 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.07□□□□□ -1.44
USP8P40818 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.07□□□□□ -1.44
USP8P40818 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.07□□□□□ -1.44
USP8P40818 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.07□□□□□ -1.44
USP8P40818 AC239803.2-201ENST00000610161 430 ntBASIC6.07□□□□□ -1.44
USP8P40818 AC022960.2-201ENST00000616300 666 ntBASIC6.07□□□□□ -1.44
USP8P40818 AC243960.7-201ENST00000623532 707 ntBASIC6.07□□□□□ -1.44
USP8P40818 AC129915.3-201ENST00000634128 948 ntBASIC6.07□□□□□ -1.44
USP8P40818 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 AL078621.3-201ENST00000623707 2042 ntBASIC6.07□□□□□ -1.44
USP8P40818 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.07□□□□□ -1.44
USP8P40818 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP8P40818 MRE11P1-201ENST00000464884 2127 ntBASIC6.07□□□□□ -1.44
USP8P40818 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP8P40818 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP8P40818 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.06□□□□□ -1.44
USP8P40818 AC019072.1-201ENST00000604535 1551 ntBASIC6.06□□□□□ -1.44
USP8P40818 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP8P40818 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.06□□□□□ -1.44
USP8P40818 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USP8P40818 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USP8P40818 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USP8P40818 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP8P40818 LYPLA1P3-201ENST00000402650 695 ntBASIC6.06□□□□□ -1.44
USP8P40818 MTND3P20-201ENST00000407663 186 ntBASIC6.06□□□□□ -1.44
USP8P40818 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.06□□□□□ -1.44
USP8P40818 OR10T1P-201ENST00000424327 947 ntBASIC6.06□□□□□ -1.44
USP8P40818 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP8P40818 HMGN1P2-201ENST00000445197 310 ntBASIC6.06□□□□□ -1.44
USP8P40818 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.06□□□□□ -1.44
USP8P40818 ENPP7P11-201ENST00000505915 627 ntBASIC6.06□□□□□ -1.44
USP8P40818 DUTP7-201ENST00000507982 486 ntBASIC6.06□□□□□ -1.44
USP8P40818 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.06□□□□□ -1.44
USP8P40818 HMGB1P42-201ENST00000532126 553 ntBASIC6.06□□□□□ -1.44
USP8P40818 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.06□□□□□ -1.44
USP8P40818 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USP8P40818 EIF1AXP2-201ENST00000555940 413 ntBASIC6.06□□□□□ -1.44
USP8P40818 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.06□□□□□ -1.44
USP8P40818 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms