Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CLIP1P30622 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CLIP1P30622 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.46□□□□□ -1.06
CLIP1P30622 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CLIP1P30622 AL139128.1-201ENST00000413921 941 ntBASIC8.46□□□□□ -1.06
CLIP1P30622 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.46□□□□□ -1.06
CLIP1P30622 RPA2P2-201ENST00000419698 796 ntBASIC8.46□□□□□ -1.06
CLIP1P30622 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.46□□□□□ -1.06
CLIP1P30622 AC079064.1-201ENST00000528365 362 ntBASIC8.46□□□□□ -1.06
CLIP1P30622 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.46□□□□□ -1.06
CLIP1P30622 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.46□□□□□ -1.06
CLIP1P30622 AL356608.1-201ENST00000610034 820 ntBASIC8.46□□□□□ -1.06
CLIP1P30622 AL352984.2-202ENST00000613699 155 ntBASIC8.46□□□□□ -1.06
CLIP1P30622 CCL14-204ENST00000622526 472 ntTSL 3 BASIC8.46□□□□□ -1.06
CLIP1P30622 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.46□□□□□ -1.06
CLIP1P30622 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CLIP1P30622 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.45□□□□□ -1.06
CLIP1P30622 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.45□□□□□ -1.06
CLIP1P30622 AC124944.2-201ENST00000429866 1242 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 RPS11P7-201ENST00000442125 465 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.45□□□□□ -1.06
CLIP1P30622 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 RPS4XP20-201ENST00000505751 772 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 GLUD1P3-202ENST00000508551 200 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 AC136777.2-201ENST00000522979 358 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 AC130364.2-201ENST00000528639 604 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 AP005432.2-201ENST00000608162 586 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 AC021422.1-201ENST00000621212 473 ntBASIC8.45□□□□□ -1.06
CLIP1P30622 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CLIP1P30622 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CLIP1P30622 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CLIP1P30622 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
CLIP1P30622 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CLIP1P30622 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CLIP1P30622 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 AC009784.1-201ENST00000426484 460 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 RBMY2QP-201ENST00000429799 1147 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 BX276092.6-201ENST00000430476 250 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 NOP56P2-201ENST00000447491 769 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 BX276092.8-201ENST00000455722 250 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.44□□□□□ -1.06
CLIP1P30622 AC093827.1-201ENST00000480094 861 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.44□□□□□ -1.06
CLIP1P30622 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC8.44□□□□□ -1.06
CLIP1P30622 AP002373.2-201ENST00000541631 1060 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 AC092490.3-201ENST00000545370 572 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CLIP1P30622 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.44□□□□□ -1.06
CLIP1P30622 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.44□□□□□ -1.06
CLIP1P30622 AP005131.7-201ENST00000610087 611 ntBASIC8.44□□□□□ -1.06
CLIP1P30622 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CLIP1P30622 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CLIP1P30622 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CLIP1P30622 NUDT19P3-201ENST00000404698 555 ntBASIC8.43□□□□□ -1.06
CLIP1P30622 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CLIP1P30622 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.43□□□□□ -1.06
CLIP1P30622 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC8.43□□□□□ -1.06
CLIP1P30622 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.43□□□□□ -1.06
CLIP1P30622 AC108161.1-201ENST00000461060 402 ntBASIC8.43□□□□□ -1.06
CLIP1P30622 IGBP1P4-201ENST00000503202 879 ntBASIC8.43□□□□□ -1.06
CLIP1P30622 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.43□□□□□ -1.06
CLIP1P30622 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.43□□□□□ -1.06
CLIP1P30622 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.43□□□□□ -1.06
CLIP1P30622 PRELID3BP3-201ENST00000584963 545 ntBASIC8.43□□□□□ -1.06
CLIP1P30622 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 AC005252.1-201ENST00000604518 1063 ntBASIC8.43□□□□□ -1.06
CLIP1P30622 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CLIP1P30622 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CLIP1P30622 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CLIP1P30622 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CLIP1P30622 RNU4-4P-201ENST00000364588 130 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.42□□□□□ -1.06
CLIP1P30622 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.42□□□□□ -1.06
CLIP1P30622 AL133482.1-201ENST00000415988 498 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CLIP1P30622 AC009127.1-201ENST00000467090 155 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.42□□□□□ -1.06
CLIP1P30622 HMGN1P9-201ENST00000515212 298 ntBASIC8.42□□□□□ -1.06
CLIP1P30622 RNA5SP228-201ENST00000516232 133 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms