Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SDAD1P1-202ENST00000524156 2051 ntBASIC6.27□□□□□ -1.41
COL4A5P29400 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.27□□□□□ -1.41
COL4A5P29400 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL4A5P29400 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
COL4A5P29400 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
COL4A5P29400 RNU2-50P-201ENST00000410494 143 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A5P29400 AC007064.3-201ENST00000422608 359 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 AL356981.1-201ENST00000454879 684 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 SNORD125-201ENST00000459538 96 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A5P29400 AC020937.1-201ENST00000519677 1013 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A5P29400 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A5P29400 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A5P29400 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A5P29400 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL4A5P29400 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A5P29400 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.26□□□□□ -1.41
COL4A5P29400 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 AC003973.3-201ENST00000624863 2822 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL4A5P29400 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A5P29400 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
COL4A5P29400 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A5P29400 SNORA70.2-201ENST00000364506 135 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 RPS16P5-201ENST00000406501 404 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 RSL24D1P6-201ENST00000426934 401 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL4A5P29400 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL4A5P29400 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 NOP56P2-201ENST00000447491 769 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 AC079168.1-201ENST00000458741 345 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 RPS23P7-201ENST00000466210 444 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 RN7SL817P-201ENST00000480777 288 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 GAPDHP56-201ENST00000506031 988 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 GLUD1P3-202ENST00000508551 200 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 GAPDHP62-201ENST00000515313 990 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.26□□□□□ -1.41
COL4A5P29400 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
COL4A5P29400 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 AP003400.3-201ENST00000624904 346 ntBASIC6.26□□□□□ -1.41
COL4A5P29400 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL4A5P29400 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A5P29400 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.25□□□□□ -1.41
COL4A5P29400 AC092070.2-203ENST00000598377 3644 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 AC010928.1-201ENST00000592477 1447 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 AC232271.1-201ENST00000602455 2715 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 Y_RNA.126-201ENST00000363382 111 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 PPIAP9-201ENST00000403866 498 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 CHIAP3-201ENST00000423668 1133 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AC007559.1-201ENST00000428736 355 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.25□□□□□ -1.41
COL4A5P29400 AC234781.3-201ENST00000452540 973 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 RN7SL188P-201ENST00000469842 285 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AC023818.1-201ENST00000498379 384 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.25□□□□□ -1.41
COL4A5P29400 AC012400.1-201ENST00000518452 381 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.25□□□□□ -1.41
COL4A5P29400 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.25□□□□□ -1.41
COL4A5P29400 AC136624.4-201ENST00000573044 370 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 AC009027.1-201ENST00000604510 479 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 OR52H1-202ENST00000641796 1061 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL4A5P29400 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 AL031123.3-201ENST00000623345 1837 ntBASIC6.25□□□□□ -1.41
COL4A5P29400 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL4A5P29400 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL4A5P29400 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A5P29400 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A5P29400 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
COL4A5P29400 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 HMGB3P7-201ENST00000400214 611 ntBASIC6.24□□□□□ -1.41
COL4A5P29400 AL359265.2-201ENST00000434367 631 ntBASIC6.24□□□□□ -1.41
COL4A5P29400 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A5P29400 KRT8P51-201ENST00000438938 274 ntBASIC6.24□□□□□ -1.41
COL4A5P29400 TXNP5-201ENST00000441043 315 ntBASIC6.24□□□□□ -1.41
COL4A5P29400 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A5P29400 RN7SKP260-201ENST00000516907 149 ntBASIC6.24□□□□□ -1.41
COL4A5P29400 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.24□□□□□ -1.41
COL4A5P29400 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A5P29400 AC016717.3-201ENST00000624730 554 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms