Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 RNU6-1331P-201ENST00000363658 106 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 MTND6P12-201ENST00000428247 522 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN6P29350 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN6P29350 AL596266.1-201ENST00000448132 400 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 AZGP1P2-201ENST00000454506 345 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 OR2AF1P-201ENST00000454899 889 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 UBFD1P1-201ENST00000473259 814 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 ATP5LP5-201ENST00000483050 299 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 SNORA70.20-201ENST00000516848 126 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 IGLVIV-64-201ENST00000518581 301 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC025857.1-201ENST00000525252 377 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN6P29350 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 MIR3614-201ENST00000581261 86 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 MIR4260-201ENST00000583107 67 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN6P29350 MIR6862-1-201ENST00000613016 70 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 MIR6862-2-201ENST00000614755 70 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN6P29350 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 AC006840.1-201ENST00000623069 542 ntBASIC5.33□□□□□ -1.56
PTPN6P29350 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN6P29350 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTPN6P29350 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN6P29350 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN6P29350 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 AC106872.5-201ENST00000508856 1416 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN6P29350 AP001029.2-203ENST00000589795 4910 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN6P29350 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PTPN6P29350 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN6P29350 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 RN7SKP292-201ENST00000365522 317 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 SNORA70.6-201ENST00000383934 134 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AL031985.1-201ENST00000392713 418 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 EEF1B2P8-201ENST00000414101 671 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN6P29350 AK4P4-201ENST00000419465 646 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN6P29350 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN6P29350 TMEM183AP1-205ENST00000432739 290 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AL359265.1-201ENST00000440296 795 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 RPL5P25-201ENST00000441148 775 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 AL445665.1-202ENST00000452436 324 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN6P29350 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 RPL32P33-201ENST00000487023 394 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 RPL7P51-201ENST00000490532 749 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN6P29350 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 AC021106.1-201ENST00000509020 1058 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN6P29350 IGKV3D-34-201ENST00000522638 302 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN6P29350 HNRNPRP2-201ENST00000528421 743 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN6P29350 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN6P29350 AC084033.1-201ENST00000550830 633 ntBASIC5.32□□□□□ -1.56
PTPN6P29350 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN6P29350 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms