Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ABCD3P28288 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 OOSP1-201ENST00000398992 1270 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 MYL6P5-201ENST00000412707 459 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.52□□□□□ -1.53
ABCD3P28288 MRPS21P2-201ENST00000424704 264 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.52□□□□□ -1.53
ABCD3P28288 AL158053.1-201ENST00000441503 453 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AL035551.1-201ENST00000446931 348 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AL162739.1-201ENST00000450606 307 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 SDC4P-201ENST00000453285 601 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 AL445687.2-201ENST00000458156 728 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC023245.1-201ENST00000468501 517 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AL355032.1-201ENST00000472981 438 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC092902.1-201ENST00000486999 259 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 MTND3P3-201ENST00000505004 126 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC025458.1-201ENST00000506046 166 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 SCARNA18.1-201ENST00000516330 83 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC018442.3-201ENST00000523025 183 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.52□□□□□ -1.53
ABCD3P28288 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.52□□□□□ -1.53
ABCD3P28288 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.52□□□□□ -1.53
ABCD3P28288 SS18L2P2-201ENST00000583960 235 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCD3P28288 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.52□□□□□ -1.53
ABCD3P28288 AL136097.3-201ENST00000611097 505 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 MIR6809-201ENST00000612189 116 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 U1.31-201ENST00000620022 160 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.52□□□□□ -1.53
ABCD3P28288 AC092070.2-203ENST00000598377 3644 ntBASIC5.52□□□□□ -1.53
ABCD3P28288 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCD3P28288 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.51□□□□□ -1.53
ABCD3P28288 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ABCD3P28288 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ABCD3P28288 MIR16-2-201ENST00000362117 81 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 MIR320B1-201ENST00000390209 79 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ABCD3P28288 AL121835.1-201ENST00000404250 354 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 UBE2V1P11-201ENST00000411559 285 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCD3P28288 RPS6P14-201ENST00000425165 719 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCD3P28288 AL512637.2-201ENST00000431287 1256 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCD3P28288 RPS7P3-201ENST00000443360 580 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 BMS1P10-201ENST00000443754 1120 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 RPL5P10-201ENST00000445207 894 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 HMGB1P26-201ENST00000452520 628 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 ACA64.4-201ENST00000459070 127 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC008629.2-201ENST00000503783 483 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCD3P28288 AC013701.1-201ENST00000522657 465 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 CIR1P1-201ENST00000524055 1133 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.51□□□□□ -1.53
ABCD3P28288 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 AL136131.3-201ENST00000607600 188 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 MIR6793-201ENST00000612376 63 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AL021918.2-201ENST00000613415 194 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AP004607.9-201ENST00000618202 316 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 AC024023.1-201ENST00000624530 922 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 SAMMSON-209ENST00000641222 1100 ntBASIC5.51□□□□□ -1.53
ABCD3P28288 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
ABCD3P28288 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCD3P28288 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms