Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC023886.2-201ENST00000321285 411 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 RNU6-831P-201ENST00000384548 107 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.19□□□□□ -1.1
COL9A1P20849 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 RBMY2QP-201ENST00000429799 1147 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 HMGB3P22-202ENST00000451823 572 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 APOOP2-201ENST00000461561 539 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AL591122.1-201ENST00000487348 492 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AC108693.1-201ENST00000496068 432 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 MINOS1P4-201ENST00000515470 318 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 RNU6-1004P-201ENST00000516584 111 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 RNU6-885P-201ENST00000516607 104 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AP003181.2-201ENST00000528941 181 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 OR5D15P-201ENST00000531671 942 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC099489.2-201ENST00000574976 260 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC011500.1-201ENST00000601963 469 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AL358335.3-201ENST00000604678 327 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AL121782.1-201ENST00000611242 413 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 uc_338.15-201ENST00000615470 191 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AC137590.2-201ENST00000619709 240 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
COL9A1P20849 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 Z83820.1-201ENST00000456978 1499 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 AC012467.2-201ENST00000607783 2583 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 AC095038.1-201ENST00000429248 1591 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.18□□□□□ -1.1
COL9A1P20849 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.18□□□□□ -1.1
COL9A1P20849 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
COL9A1P20849 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 AL133384.2-201ENST00000623755 2954 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
COL9A1P20849 AL359634.1-202ENST00000404721 284 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 PKMP3-201ENST00000405497 715 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 MIR548M-201ENST00000408260 86 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 RN7SKP26-201ENST00000410247 293 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 HMGB3P2-201ENST00000411913 584 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.18□□□□□ -1.1
COL9A1P20849 AC234782.4-201ENST00000417646 1048 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 BOLA3P4-201ENST00000418151 400 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.18□□□□□ -1.1
COL9A1P20849 AC023347.2-201ENST00000433994 462 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 SNRPEP7-201ENST00000438350 220 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 LIN28AP2-201ENST00000445283 458 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC8.18□□□□□ -1.1
COL9A1P20849 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.18□□□□□ -1.1
COL9A1P20849 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.18□□□□□ -1.1
COL9A1P20849 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL9A1P20849 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.18□□□□□ -1.1
COL9A1P20849 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC8.18□□□□□ -1.1
COL9A1P20849 TECRP2-201ENST00000503270 928 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AC112203.1-201ENST00000506315 1020 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AC021146.1-201ENST00000511202 716 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 NRBF2P4-201ENST00000520874 850 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 IGLVVI-25-1-201ENST00000521893 249 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.18□□□□□ -1.1
COL9A1P20849 SUB1P1-201ENST00000524415 382 ntBASIC8.18□□□□□ -1.1
COL9A1P20849 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.18□□□□□ -1.1
COL9A1P20849 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms