Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 AP003789.1-201ENST00000617737 605 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 AL354718.1-201ENST00000619764 589 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AP002782.1-201ENST00000623107 614 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC092608.3-201ENST00000625017 386 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 OR8G3P-202ENST00000641572 1255 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 NEPNP-201ENST00000404786 1371 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
LMNB1P20700 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 MTND5P11-201ENST00000511037 1812 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC139426.3-201ENST00000605648 2059 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LMNB1P20700 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LMNB1P20700 RN7SKP162-201ENST00000363605 345 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 SNORD116-4-201ENST00000384733 96 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 SFR1P1-201ENST00000403720 688 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 RNA5SP156-201ENST00000410250 110 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 Y_RNA.625-201ENST00000411256 107 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.65□□□□□ -1.18
LMNB1P20700 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LMNB1P20700 WDR95P-201ENST00000425638 1542 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.65□□□□□ -1.18
LMNB1P20700 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 MTCO2P7-201ENST00000446518 666 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC7.65□□□□□ -1.18
LMNB1P20700 ATG12P2-201ENST00000456830 416 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 RPL6P9-201ENST00000466502 859 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AC092865.4-201ENST00000477936 615 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 RN7SL466P-201ENST00000497546 295 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.65□□□□□ -1.18
LMNB1P20700 AC079064.1-201ENST00000528365 362 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LMNB1P20700 GCSHP4-201ENST00000538792 439 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LMNB1P20700 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.65□□□□□ -1.18
LMNB1P20700 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.65□□□□□ -1.18
LMNB1P20700 DPPA3P2-202ENST00000557188 1219 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.65□□□□□ -1.18
LMNB1P20700 AL035411.2-201ENST00000604022 421 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AC022106.1-201ENST00000612834 766 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 AC137056.2-201ENST00000624055 1958 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 AP003497.2-201ENST00000624220 967 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.65□□□□□ -1.18
LMNB1P20700 MAPK10-261ENST00000641050 3109 ntBASIC7.65□□□□□ -1.18
LMNB1P20700 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.65□□□□□ -1.19
LMNB1P20700 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LMNB1P20700 AC009237.3-203ENST00000442128 3551 ntBASIC7.65□□□□□ -1.19
LMNB1P20700 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.19
LMNB1P20700 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
LMNB1P20700 AC104162.1-201ENST00000430831 2382 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LMNB1P20700 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.64□□□□□ -1.19
LMNB1P20700 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.64□□□□□ -1.19
LMNB1P20700 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LMNB1P20700 AC073342.2-201ENST00000595842 1800 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
LMNB1P20700 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LMNB1P20700 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LMNB1P20700 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LMNB1P20700 U3.7-201ENST00000363668 216 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 RNA5SP514-201ENST00000363717 111 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.64□□□□□ -1.19
LMNB1P20700 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
LMNB1P20700 AL021331.1-201ENST00000402817 582 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 NPM1P37-201ENST00000403105 874 ntBASIC7.64□□□□□ -1.19
LMNB1P20700 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms