Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AP002530.1-201ENST00000405705 684 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL5A2P05997 HSPD1P12-201ENST00000429127 1069 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 RPL7P11-201ENST00000437586 658 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 RN7SL188P-201ENST00000469842 285 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 RPL23AP72-201ENST00000492447 435 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.96□□□□□ -1.3
COL5A2P05997 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.96□□□□□ -1.3
COL5A2P05997 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.96□□□□□ -1.3
COL5A2P05997 AC073869.8-201ENST00000641806 335 ntBASIC6.96□□□□□ -1.3
COL5A2P05997 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL5A2P05997 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL5A2P05997 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.96□□□□□ -1.3
COL5A2P05997 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL5A2P05997 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL5A2P05997 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 HSPA8P15-201ENST00000401676 786 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 AC093414.1-201ENST00000434712 514 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 RN7SL354P-201ENST00000469282 294 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 RPL7P40-201ENST00000481703 745 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 RNA5SP43-201ENST00000516559 110 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 OR7E128P-201ENST00000532736 1024 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL5A2P05997 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.95□□□□□ -1.3
COL5A2P05997 MIR3667-201ENST00000581025 74 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.95□□□□□ -1.3
COL5A2P05997 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
COL5A2P05997 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL5A2P05997 AC232271.1-201ENST00000602455 2715 ntBASIC6.95□□□□□ -1.3
COL5A2P05997 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
COL5A2P05997 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL5A2P05997 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL5A2P05997 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 SDAD1P1-202ENST00000524156 2051 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL5A2P05997 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.94□□□□□ -1.3
COL5A2P05997 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.94□□□□□ -1.3
COL5A2P05997 CYCSP42-201ENST00000450823 238 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.94□□□□□ -1.3
COL5A2P05997 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL5A2P05997 STRADBP1-201ENST00000478954 1281 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
COL5A2P05997 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.94□□□□□ -1.3
COL5A2P05997 AC008147.3-201ENST00000548666 354 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 AC091042.1-201ENST00000579213 173 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 AL353729.2-201ENST00000605859 1249 ntBASIC6.94□□□□□ -1.3
COL5A2P05997 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL5A2P05997 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.94□□□□□ -1.3
COL5A2P05997 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
COL5A2P05997 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL5A2P05997 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.94□□□□□ -1.3
COL5A2P05997 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL5A2P05997 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.93□□□□□ -1.3
COL5A2P05997 RPL23AP17-201ENST00000401064 499 ntBASIC6.93□□□□□ -1.3
COL5A2P05997 SSR1P1-201ENST00000407630 814 ntBASIC6.93□□□□□ -1.3
COL5A2P05997 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL5A2P05997 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.93□□□□□ -1.3
COL5A2P05997 AC112498.1-201ENST00000444401 332 ntBASIC6.93□□□□□ -1.3
COL5A2P05997 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.93□□□□□ -1.3
COL5A2P05997 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.93□□□□□ -1.3
COL5A2P05997 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.93□□□□□ -1.3
COL5A2P05997 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms