Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNA5SP319-201ENST00000362768 119 ntBASIC5.77□□□□□ -1.49
APOEP02649 RN7SKP145-201ENST00000363291 303 ntBASIC5.77□□□□□ -1.49
APOEP02649 RN7SKP6-201ENST00000364795 319 ntBASIC5.77□□□□□ -1.49
APOEP02649 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.77□□□□□ -1.49
APOEP02649 AL391422.1-201ENST00000402155 436 ntBASIC5.77□□□□□ -1.49
APOEP02649 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.77□□□□□ -1.49
APOEP02649 Z93019.1-201ENST00000416450 973 ntBASIC5.77□□□□□ -1.49
APOEP02649 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.77□□□□□ -1.49
APOEP02649 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.77□□□□□ -1.49
APOEP02649 AL161722.1-201ENST00000446972 1032 ntBASIC5.77□□□□□ -1.49
APOEP02649 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.77□□□□□ -1.49
APOEP02649 RN7SL51P-201ENST00000468230 285 ntBASIC5.77□□□□□ -1.49
APOEP02649 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
APOEP02649 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 AC010503.3-201ENST00000594355 540 ntBASIC5.77□□□□□ -1.49
APOEP02649 MIR6768-201ENST00000610734 72 ntBASIC5.77□□□□□ -1.49
APOEP02649 AC132068.1-201ENST00000623805 459 ntBASIC5.77□□□□□ -1.49
APOEP02649 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 AC073869.7-201ENST00000640874 297 ntBASIC5.77□□□□□ -1.49
APOEP02649 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
APOEP02649 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.77□□□□□ -1.49
APOEP02649 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 CASC19-248ENST00000641674 1356 ntBASIC5.77□□□□□ -1.49
APOEP02649 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
APOEP02649 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.77□□□□□ -1.49
APOEP02649 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
APOEP02649 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
APOEP02649 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
APOEP02649 AC027279.1-201ENST00000568885 4284 ntBASIC5.76□□□□□ -1.49
APOEP02649 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.76□□□□□ -1.49
APOEP02649 AC007938.2-201ENST00000604666 2634 ntBASIC5.76□□□□□ -1.49
APOEP02649 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
APOEP02649 U3.25-201ENST00000391209 220 ntBASIC5.76□□□□□ -1.49
APOEP02649 EI24P3-201ENST00000399046 1062 ntBASIC5.76□□□□□ -1.49
APOEP02649 OR3A2-201ENST00000408891 1076 ntBASIC5.76□□□□□ -1.49
APOEP02649 AL121878.1-201ENST00000418638 859 ntBASIC5.76□□□□□ -1.49
APOEP02649 AL390119.1-201ENST00000440329 312 ntBASIC5.76□□□□□ -1.49
APOEP02649 AC092106.1-201ENST00000444291 373 ntBASIC5.76□□□□□ -1.49
APOEP02649 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 AC100832.1-201ENST00000471945 383 ntBASIC5.76□□□□□ -1.49
APOEP02649 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 RN7SKP253-201ENST00000516424 309 ntBASIC5.76□□□□□ -1.49
APOEP02649 OR5AM1P-201ENST00000532136 1032 ntBASIC5.76□□□□□ -1.49
APOEP02649 AC122688.1-201ENST00000541494 223 ntBASIC5.76□□□□□ -1.49
APOEP02649 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.76□□□□□ -1.49
APOEP02649 FAM72A-208ENST00000607379 1139 ntBASIC5.76□□□□□ -1.49
APOEP02649 MIR6862-1-201ENST00000613016 70 ntBASIC5.76□□□□□ -1.49
APOEP02649 MIR6862-2-201ENST00000614755 70 ntBASIC5.76□□□□□ -1.49
APOEP02649 AL118522.2-201ENST00000616045 615 ntBASIC5.76□□□□□ -1.49
APOEP02649 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
APOEP02649 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.76□□□□□ -1.49
APOEP02649 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
APOEP02649 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.76□□□□□ -1.49
APOEP02649 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
APOEP02649 AL162456.1-201ENST00000634535 2006 ntBASIC5.75□□□□□ -1.49
APOEP02649 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
APOEP02649 AC012075.1-201ENST00000436549 580 ntBASIC5.75□□□□□ -1.49
APOEP02649 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 AC019185.1-201ENST00000442718 389 ntBASIC5.75□□□□□ -1.49
APOEP02649 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 LINC02210-201ENST00000444561 288 ntBASIC5.75□□□□□ -1.49
APOEP02649 IGBP1P3-201ENST00000447449 1000 ntBASIC5.75□□□□□ -1.49
APOEP02649 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 RN7SL583P-201ENST00000475692 287 ntBASIC5.75□□□□□ -1.49
APOEP02649 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.75□□□□□ -1.49
APOEP02649 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 RPL7L1P4-201ENST00000513004 707 ntBASIC5.75□□□□□ -1.49
APOEP02649 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.75□□□□□ -1.49
APOEP02649 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.75□□□□□ -1.49
APOEP02649 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.75□□□□□ -1.49
APOEP02649 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms