Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC007382.1-201ENST00000624376 2618 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 AC090181.3-201ENST00000624777 1514 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 AP001284.1-201ENST00000528393 2118 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 AC097063.1-201ENST00000426714 1797 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 RNU6-517P-201ENST00000384362 110 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC019178.1-201ENST00000392337 440 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 ATF1P1-201ENST00000406040 927 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 RPL30P16-201ENST00000419341 429 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.04□□□□□ -1.44
CNOT4O95628 EIF4A1P1-201ENST00000420241 934 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 RPL23AP85-201ENST00000421838 433 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 PTPN2P1-201ENST00000423212 1072 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 CYCSP51-201ENST00000443545 318 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 GAPDHP20-201ENST00000444107 1007 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 RPS27P5-201ENST00000444247 244 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 TAF9P1-201ENST00000445421 515 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 AL096803.2-201ENST00000450032 677 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AL358876.1-201ENST00000453364 1075 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 TAF9P2-201ENST00000454958 515 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC099670.1-201ENST00000455141 783 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AL133244.1-201ENST00000456007 258 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 SRRM1P2-201ENST00000464531 1192 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 BZW1P2-201ENST00000473537 826 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 AC128716.1-201ENST00000475129 166 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC090114.3-201ENST00000479267 829 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 SNX18P23-201ENST00000510867 677 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC008837.1-201ENST00000511513 412 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 TMEM97P2-201ENST00000517841 403 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC060788.1-201ENST00000521318 469 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC104417.1-201ENST00000523974 751 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.04□□□□□ -1.44
CNOT4O95628 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.04□□□□□ -1.44
CNOT4O95628 MIR4310-201ENST00000582950 57 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 CBX3P2-202ENST00000583365 535 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.04□□□□□ -1.44
CNOT4O95628 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 AC011500.1-201ENST00000601963 469 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC078795.2-201ENST00000602835 1252 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC093765.1-201ENST00000603758 881 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 RPS4XP21-201ENST00000603814 750 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.04□□□□□ -1.44
CNOT4O95628 RN7SKP299-201ENST00000606679 301 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AL139286.2-201ENST00000606838 396 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC091768.1-201ENST00000609258 930 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AL445423.1-201ENST00000609941 536 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AL356274.1-201ENST00000617064 410 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 MIR7854-201ENST00000620068 65 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.04□□□□□ -1.44
CNOT4O95628 AL596275.2-208ENST00000641192 594 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNOT4O95628 AL031651.1-201ENST00000615357 1438 ntBASIC6.04□□□□□ -1.44
CNOT4O95628 AC015689.2-201ENST00000528172 1738 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms