Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 RN7SL366P-201ENST00000577957 292 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.36□□□□□ -1.07
RNF40O75150 MIR5010-201ENST00000582846 120 ntBASIC8.36□□□□□ -1.07
RNF40O75150 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 AC113361.1-201ENST00000606683 543 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RNF40O75150 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 AC091905.1-201ENST00000624400 311 ntBASIC8.36□□□□□ -1.07
RNF40O75150 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.36□□□□□ -1.07
RNF40O75150 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.36□□□□□ -1.07
RNF40O75150 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RNF40O75150 NSRP1P1-201ENST00000444067 1693 ntBASIC8.36□□□□□ -1.07
RNF40O75150 AC092725.2-201ENST00000567658 1389 ntBASIC8.35□□□□□ -1.07
RNF40O75150 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 CTAGE11P-201ENST00000451540 2353 ntBASIC8.35□□□□□ -1.07
RNF40O75150 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RNF40O75150 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 TRIM51EP-201ENST00000524374 1516 ntBASIC8.35□□□□□ -1.07
RNF40O75150 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.35□□□□□ -1.07
RNF40O75150 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 OR51A10P-201ENST00000307165 937 ntBASIC8.35□□□□□ -1.07
RNF40O75150 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 Y_RNA.579-201ENST00000390939 94 ntBASIC8.35□□□□□ -1.07
RNF40O75150 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 ATP5HP3-201ENST00000396994 486 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC025750.1-201ENST00000399891 379 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AL161787.1-201ENST00000401543 174 ntBASIC8.35□□□□□ -1.07
RNF40O75150 RPL5P18-201ENST00000406671 891 ntBASIC8.35□□□□□ -1.07
RNF40O75150 RNU2-42P-201ENST00000410697 113 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC113618.1-201ENST00000416747 285 ntBASIC8.35□□□□□ -1.07
RNF40O75150 MTCO2P5-201ENST00000422621 426 ntBASIC8.35□□□□□ -1.07
RNF40O75150 Z68868.1-201ENST00000429048 544 ntBASIC8.35□□□□□ -1.07
RNF40O75150 EEF1A1P27-201ENST00000429983 1135 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 GTF2IP13-201ENST00000438487 386 ntBASIC8.35□□□□□ -1.07
RNF40O75150 COX6CP18-201ENST00000448769 222 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 AC114755.1-201ENST00000453101 868 ntBASIC8.35□□□□□ -1.07
RNF40O75150 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 YAP1P2-201ENST00000455104 610 ntBASIC8.35□□□□□ -1.07
RNF40O75150 C1DP4-201ENST00000455429 424 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.35□□□□□ -1.07
RNF40O75150 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 AC099521.1-201ENST00000482557 334 ntBASIC8.35□□□□□ -1.07
RNF40O75150 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 AC108078.3-201ENST00000502633 489 ntBASIC8.35□□□□□ -1.07
RNF40O75150 CDC42P3-201ENST00000518493 633 ntBASIC8.35□□□□□ -1.07
RNF40O75150 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.35□□□□□ -1.07
RNF40O75150 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC8.35□□□□□ -1.07
RNF40O75150 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 BMS1P15-201ENST00000554269 1141 ntBASIC8.35□□□□□ -1.07
RNF40O75150 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 AL355076.3-201ENST00000555838 587 ntBASIC8.35□□□□□ -1.07
RNF40O75150 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.35□□□□□ -1.07
RNF40O75150 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RNF40O75150 AL596327.1-201ENST00000603629 213 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC009597.2-201ENST00000604659 592 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC016925.2-201ENST00000605108 242 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC018695.5-201ENST00000605872 315 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC106782.6-201ENST00000611264 512 ntBASIC8.35□□□□□ -1.07
RNF40O75150 7SK.12-201ENST00000612820 244 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.35□□□□□ -1.07
RNF40O75150 AC018558.4-201ENST00000622153 281 ntBASIC8.35□□□□□ -1.07
RNF40O75150 AC011815.3-201ENST00000624194 473 ntBASIC8.35□□□□□ -1.07
RNF40O75150 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 RLIMP2-201ENST00000427891 1563 ntBASIC8.35□□□□□ -1.07
RNF40O75150 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
RNF40O75150 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RNF40O75150 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 CASC19-243ENST00000641588 1546 ntBASIC8.34□□□□□ -1.07
RNF40O75150 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms