Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SDCBPO00560 HSPD1P12-201ENST00000429127 1069 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.56□□□□□ -1.68
SDCBPO00560 AP000547.1-201ENST00000454360 617 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 NDUFA5P5-201ENST00000468361 342 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AP000797.2-201ENST00000475768 606 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 COX6B1P2-201ENST00000489624 230 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 IMPA1P1-201ENST00000510718 842 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.56□□□□□ -1.68
SDCBPO00560 SNORA43.3-201ENST00000517240 103 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 IGKV2-4-201ENST00000523070 340 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AC027369.5-201ENST00000533838 755 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.56□□□□□ -1.68
SDCBPO00560 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 RBM22P12-201ENST00000567098 1255 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.56□□□□□ -1.68
SDCBPO00560 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.56□□□□□ -1.68
SDCBPO00560 OR7A8P-201ENST00000595427 913 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 OR51C1P-201ENST00000608504 942 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 AC099654.6-201ENST00000636487 512 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.56□□□□□ -1.68
SDCBPO00560 AC003985.2-201ENST00000562268 1669 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.56□□□□□ -1.68
SDCBPO00560 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 AC006484.1-201ENST00000435086 1884 ntBASIC4.56□□□□□ -1.68
SDCBPO00560 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SDCBPO00560 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SDCBPO00560 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 TRIM51GP-201ENST00000534741 1350 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 LYPLA1P3-201ENST00000402650 695 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 GAPDHP42-201ENST00000406848 981 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 SLC20A1P1-201ENST00000413906 956 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 RPL34P3-201ENST00000421454 338 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.55□□□□□ -1.68
SDCBPO00560 BX119321.1-201ENST00000428912 797 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 AC090018.1-201ENST00000434369 367 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 CYCSP51-201ENST00000443545 318 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 VDAC2P4-201ENST00000452925 711 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.55□□□□□ -1.68
SDCBPO00560 ENPP7P11-201ENST00000505915 627 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 EIF3KP3-201ENST00000514461 639 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.55□□□□□ -1.68
SDCBPO00560 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.55□□□□□ -1.68
SDCBPO00560 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.55□□□□□ -1.68
SDCBPO00560 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.55□□□□□ -1.68
SDCBPO00560 MRPS21P7-201ENST00000566937 238 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 AC005726.4-201ENST00000582858 458 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 PPATP2-201ENST00000605635 508 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 AC244107.2-201ENST00000611773 76 ntBASIC4.55□□□□□ -1.68
SDCBPO00560 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SDCBPO00560 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.55□□□□□ -1.68
SDCBPO00560 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 MRRFP1-201ENST00000435941 1675 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.54□□□□□ -1.68
SDCBPO00560 YES1P1-201ENST00000418510 1628 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC114947.2-201ENST00000565748 2125 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 AC022417.1-201ENST00000624768 1303 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SDCBPO00560 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AC091305.2-201ENST00000624049 1576 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms