Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
SLC28A1O00337 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC28A1O00337 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SLC28A1O00337 TCP11X1-202ENST00000622971 1372 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC28A1O00337 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
SLC28A1O00337 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 RNU6-891P-201ENST00000384280 111 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 RPSAP35-201ENST00000413753 818 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC28A1O00337 RN7SL583P-201ENST00000475692 287 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AP000797.2-201ENST00000475768 606 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AC091544.1-201ENST00000484702 348 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.32□□□□□ -1.56
SLC28A1O00337 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 RNU6-551P-201ENST00000516661 103 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 MRPS16P1-201ENST00000523462 412 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AP004609.2-201ENST00000532177 190 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC28A1O00337 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC28A1O00337 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC28A1O00337 DPPA2P4-201ENST00000563717 878 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AC092121.1-201ENST00000569452 202 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 AC087565.3-203ENST00000641018 837 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SLC28A1O00337 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SLC28A1O00337 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 AL031595.2-201ENST00000624215 19071 ntBASIC5.32□□□□□ -1.56
SLC28A1O00337 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC28A1O00337 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC28A1O00337 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC006484.1-201ENST00000435086 1884 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC28A1O00337 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 RNU4-23P-201ENST00000362839 140 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AL672167.2-201ENST00000377164 879 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 MIR551A-201ENST00000385042 96 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 RPS3AP2-201ENST00000407190 754 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC28A1O00337 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 PTP4A1P1-201ENST00000420539 515 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC110602.1-201ENST00000437414 318 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 C1DP3-201ENST00000455013 423 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC007386.1-201ENST00000455212 582 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AL356390.1-201ENST00000455684 397 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC019084.1-201ENST00000457337 432 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 RNU6-775P-201ENST00000459318 96 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC28A1O00337 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC28A1O00337 MTND3P6-201ENST00000485242 339 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 OR52A4P-203ENST00000498233 1014 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC060775.1-201ENST00000518241 520 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC005000.1-201ENST00000536192 288 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC068305.2-201ENST00000550567 1205 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 IGBP1P1-201ENST00000554337 1009 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC28A1O00337 NPM1P45-201ENST00000583151 559 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC28A1O00337 AC015802.2-201ENST00000589690 189 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 AL159169.2-201ENST00000610061 1269 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC073869.8-201ENST00000641806 335 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 AC100757.1-201ENST00000616872 1835 ntBASIC5.31□□□□□ -1.56
SLC28A1O00337 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 MTCO1P8-201ENST00000416914 1523 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms