Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC016745.2-201ENST00000608834 3443 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 MIR130A-201ENST00000385274 89 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC096921.1-201ENST00000411661 375 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 NIFKP3-201ENST00000417799 865 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 SETP10-201ENST00000424368 814 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 MRPS21P2-201ENST00000424704 264 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 NDUFS5P5-201ENST00000437256 321 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AL353898.1-201ENST00000444055 238 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AL122020.1-201ENST00000472287 459 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 OR7E157P-201ENST00000494376 911 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC137627.1-201ENST00000545761 289 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 CR589904.2-201ENST00000612533 440 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC022919.1-201ENST00000624979 626 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC006453.5-201ENST00000636451 619 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 AC004656.1-201ENST00000568479 4951 ntBASIC4.61□□□□□ -1.67
SRRM4A7MD48 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SRRM4A7MD48 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SRRM4A7MD48 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC007382.1-201ENST00000624376 2618 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC109446.4-201ENST00000623235 2755 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AL359715.3-201ENST00000569267 2123 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 RNA5SP477-201ENST00000362639 119 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 MT-TP-201ENST00000387461 68 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 RNU2-72P-201ENST00000411175 163 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 MTND2P11-201ENST00000423638 648 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 MTND4P24-201ENST00000424002 397 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 BX323845.3-201ENST00000428215 527 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC126120.1-201ENST00000431082 470 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 CLNS1AP1-201ENST00000435954 682 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC007000.2-201ENST00000442564 487 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC023512.1-201ENST00000444513 499 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AL353718.1-201ENST00000451028 517 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 MEMO1P4-201ENST00000453590 386 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 CABYRP1-201ENST00000465493 1045 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.6□□□□□ -1.67
SRRM4A7MD48 SUMO1P1-201ENST00000497904 306 ntBASIC4.6□□□□□ -1.67
SRRM4A7MD48 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SRRM4A7MD48 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms