Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC073581.1-201ENST00000519036 575 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AL512310.9-201ENST00000553311 948 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 GLRXP2-201ENST00000555594 321 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 OR7E18P-201ENST00000592589 702 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AF230666.2-201ENST00000602328 725 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 BMS1P7-201ENST00000602440 1052 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AP001033.2-201ENST00000609701 1003 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC004241.3-201ENST00000611728 517 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC007275.1-201ENST00000621243 671 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC009120.7-201ENST00000623452 780 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AP000770.2-201ENST00000623694 100 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC073342.3-201ENST00000624211 193 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AL691477.1-201ENST00000624398 162 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AP002370.1-201ENST00000528055 1602 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 PDZK1P1-202ENST00000425209 1350 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC024587.1-201ENST00000505925 2157 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 AC022034.1-201ENST00000512867 2156 ntBASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC187A0A096LP49 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RNA5SP375-201ENST00000362975 119 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 TAF9BP2-201ENST00000400856 499 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SNRPEP6-201ENST00000407465 277 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 MIR1178-201ENST00000408396 91 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AL158050.1-201ENST00000416077 457 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 BTF3P9-201ENST00000418784 283 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC114973.1-201ENST00000429057 632 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 Z80107.1-201ENST00000436830 412 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 OFD1P3Y-201ENST00000453312 783 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SETP6-201ENST00000479329 568 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 EIF3LP3-201ENST00000495197 822 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RN7SKP34-201ENST00000516142 244 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 IGLV2-28-201ENST00000520681 304 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC025918.2-201ENST00000558683 763 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC084759.1-201ENST00000561168 290 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC091057.3-201ENST00000602684 733 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RPL12P48-201ENST00000605620 304 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC026741.1-201ENST00000605892 482 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SDR42E1P1-201ENST00000611327 477 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC069234.4-201ENST00000621276 412 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 AC068057.2-201ENST00000624047 895 ntBASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC187A0A096LP49 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms