Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 PWAR1-201ENST00000624188 2414 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC005005.4-201ENST00000623789 16698 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP46-201ENST00000362370 120 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC005042.1-201ENST00000393397 800 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AL009179.1-201ENST00000406085 265 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 RMRPP5-201ENST00000411156 267 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 BMS1P17-202ENST00000416720 316 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 IPPKP1-201ENST00000422501 768 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AKR1B10P1-201ENST00000425765 942 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 PSAT1P4-201ENST00000466500 526 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC079064.1-201ENST00000528365 362 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 HSPE1P2-201ENST00000554777 306 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC105036.1-201ENST00000566222 271 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 RN7SL290P-201ENST00000578661 300 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AL139041.1-201ENST00000605480 610 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC091932.2-201ENST00000623014 291 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC007683.2-201ENST00000624681 714 ntBASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAPPC4Q9Y296 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 MRE11P1-201ENST00000464884 2127 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC091305.2-201ENST00000624049 1576 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 GAPDHP24-201ENST00000328713 983 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 RN7SKP15-201ENST00000364742 309 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AL662874.1-201ENST00000426065 230 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 MTND6P12-201ENST00000428247 522 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC079807.1-201ENST00000429993 481 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC002504.1-201ENST00000438281 691 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 PCNPP2-201ENST00000441651 455 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC073109.1-201ENST00000445066 978 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AL157385.1-201ENST00000446973 268 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 LDHBP2-201ENST00000456969 1005 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 TPT1P1-201ENST00000458495 518 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 UBFD1P1-201ENST00000473259 814 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 RN7SKP253-201ENST00000516424 309 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 NRBF2P4-201ENST00000520874 850 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC010547.6-201ENST00000571789 193 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms