Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AL133406.3-201ENST00000606817 541 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 AL353625.1-202ENST00000366273 571 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 RPL7P11-201ENST00000437586 658 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 AP000797.2-201ENST00000475768 606 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 RPL7P41-201ENST00000485823 957 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 AC007686.1-201ENST00000488511 463 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 COX6B1P5-201ENST00000509843 249 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 OR4A17P-201ENST00000526032 904 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 OR4A6P-201ENST00000534364 970 ntBASIC6.78□□□□□ -1.32
SCN11AQ9UI33 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCN11AQ9UI33 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SCN11AQ9UI33 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.32
SCN11AQ9UI33 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
SCN11AQ9UI33 CASC19-221ENST00000641309 1382 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 MGAT2P2-201ENST00000427194 797 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL161722.2-201ENST00000434731 981 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL354714.3-201ENST00000447284 493 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 RN7SL346P-201ENST00000491561 294 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 HSPA8P14-201ENST00000552265 1805 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC013442.1-201ENST00000397347 228 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL078599.1-201ENST00000402075 293 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC008072.1-201ENST00000434254 824 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AP001267.4-201ENST00000602598 545 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 MEMO1P5-201ENST00000604810 406 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 AL356608.1-201ENST00000610034 820 ntBASIC6.77□□□□□ -1.33
SCN11AQ9UI33 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCN11AQ9UI33 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.76□□□□□ -1.33
SCN11AQ9UI33 snoU13.20-201ENST00000459180 104 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms