Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 U3.23-201ENST00000391132 200 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AL390774.1-201ENST00000411924 246 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RPL35AP24-201ENST00000413846 330 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RANP7-201ENST00000418085 644 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 MRPS21P2-201ENST00000424704 264 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 CYCSP6-201ENST00000434498 302 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RPS26P41-201ENST00000450370 284 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AL606490.1-201ENST00000452266 765 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RN7SL447P-201ENST00000494711 245 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RPS17P5-201ENST00000498293 408 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RPEP1-201ENST00000504507 658 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AC024558.1-201ENST00000505008 528 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 IGLV2-28-201ENST00000520681 304 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 BLZF2P-201ENST00000553776 1130 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 HMGN2P47-201ENST00000559378 272 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 MIR1269B-201ENST00000580405 75 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AC015849.6-201ENST00000605454 474 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 AC011933.2-201ENST00000578539 2790 ntBASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CLCF1Q9UBD9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 OR4F13P-202ENST00000560066 2054 ntBASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
CLCF1Q9UBD9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 MIR133B-201ENST00000362210 119 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 U3.7-201ENST00000363668 216 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 RN7SKP278-201ENST00000410504 342 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 METTL15P3-201ENST00000415522 1221 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC117434.1-201ENST00000419971 836 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 OR10T1P-201ENST00000424327 947 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 VN1R96P-201ENST00000446052 858 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC090589.1-201ENST00000473109 362 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 RPL7P39-201ENST00000481157 744 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 ST13P12-201ENST00000508958 1094 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC027308.1-201ENST00000517993 110 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC125612.1-201ENST00000547580 377 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC126177.5-201ENST00000549599 178 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AP001267.4-201ENST00000602598 545 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AC013244.1-201ENST00000604279 193 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 AL512329.2-201ENST00000607350 548 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 WBP1LP8-201ENST00000617401 327 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLCF1Q9UBD9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms