Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SIGLEC31P-201ENST00000594237 551 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 AC020914.7-201ENST00000594477 545 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 EIF1P6-201ENST00000600054 334 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 LSM1P2-201ENST00000604911 322 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 AL035410.2-201ENST00000604963 864 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 AC090517.2-201ENST00000614966 680 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 AL357080.1-201ENST00000617394 239 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSU72Q9NP77 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
SSU72Q9NP77 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.76□□□□□ -1.33
SSU72Q9NP77 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC138393.1-206ENST00000540997 1886 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC062022.1-201ENST00000451026 1684 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 SNORA70.3-201ENST00000365075 132 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 PPIAP26-201ENST00000377951 522 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 VTA1P1-201ENST00000414044 866 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC007568.1-201ENST00000422912 471 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 GYG1P2-201ENST00000426437 1006 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 NANOGP4-201ENST00000427230 913 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 DEFA9P-201ENST00000433042 285 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 PSMD8P1-201ENST00000436275 769 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC093155.1-201ENST00000440164 826 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 EEF1E1P1-201ENST00000446998 430 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AP000542.1-201ENST00000448473 371 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 RN7SL508P-201ENST00000464472 303 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 H3F3AP5-201ENST00000475267 429 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 MYL6P4-201ENST00000477911 453 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC004924.1-201ENST00000480160 781 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 RN7SL187P-201ENST00000495587 303 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC079395.1-201ENST00000510981 262 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 IGKV2OR22-4-201ENST00000523309 367 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AP003499.1-201ENST00000527217 574 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 OR4F28P-201ENST00000559128 938 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 OR4F8P-201ENST00000589943 937 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC004908.1-201ENST00000606572 541 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 AL021368.3-201ENST00000607119 578 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 FAM74A6-203ENST00000615956 481 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 RN7SL126P-201ENST00000616400 299 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSU72Q9NP77 AC073055.1-201ENST00000456901 1621 ntBASIC6.75□□□□□ -1.33
SSU72Q9NP77 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
SSU72Q9NP77 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms