Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMG20AQ9NP66 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.95□□□□□ -1.62
HMG20AQ9NP66 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMG20AQ9NP66 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMG20AQ9NP66 XKRY2-202ENST00000623874 1581 ntBASIC4.95□□□□□ -1.62
HMG20AQ9NP66 XKRY-202ENST00000624960 1581 ntBASIC4.95□□□□□ -1.62
HMG20AQ9NP66 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMG20AQ9NP66 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL354854.1-201ENST00000455940 1363 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC068870.1-201ENST00000563737 2455 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RNU6-249P-201ENST00000363016 102 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 MIR130B-202ENST00000385018 82 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL096711.1-201ENST00000404780 554 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC019205.1-201ENST00000421830 730 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 OR5M12P-201ENST00000423388 929 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC017019.1-201ENST00000426129 261 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 PNKDP1-201ENST00000435914 430 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 TUBB4BP6-201ENST00000437576 479 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 NANOGP9-201ENST00000439890 892 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL136455.1-201ENST00000441083 1240 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 GEMIN2P1-201ENST00000454246 752 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC009963.3-201ENST00000458090 486 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC098847.1-201ENST00000473094 348 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 IGBP1P4-201ENST00000503202 879 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 HMGB1P19-201ENST00000517578 577 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RPA2P1-201ENST00000556557 721 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC090236.2-201ENST00000587933 1101 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC245014.3-201ENST00000618589 347 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AC099654.6-201ENST00000636487 512 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 CASC19-274ENST00000642018 970 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 RBPJP2-201ENST00000618187 1444 ntBASIC4.94□□□□□ -1.62
HMG20AQ9NP66 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMG20AQ9NP66 AL450345.1-202ENST00000605741 3881 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 SMG1P7-201ENST00000565246 2704 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC013442.1-201ENST00000397347 228 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC010740.1-201ENST00000417035 684 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 TIMM8BP2-201ENST00000445940 251 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 CFL1P4-201ENST00000451536 498 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 SEPT7P3-201ENST00000455017 621 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AP000942.1-201ENST00000463969 747 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AL157777.1-201ENST00000468100 304 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC099521.1-201ENST00000482557 334 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC021006.1-201ENST00000489849 553 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 DUTP1-201ENST00000493631 470 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC093225.1-201ENST00000506867 1408 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 HSD3BP3-201ENST00000514706 994 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 HMGN1P9-201ENST00000515212 298 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 RN7SKP253-201ENST00000516424 309 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 IGKV3D-25-201ENST00000519599 235 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AP003396.4-201ENST00000527574 265 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC084121.1-201ENST00000533882 835 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.93□□□□□ -1.62
HMG20AQ9NP66 MIR3154-201ENST00000577829 84 ntBASIC4.93□□□□□ -1.62
HMG20AQ9NP66 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms