Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RN7SKP162-201ENST00000363605 345 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 SNORA70-201ENST00000384436 135 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 PPIAP9-201ENST00000403866 498 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 Y_RNA.625-201ENST00000411256 107 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AP000281.1-201ENST00000444036 316 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 VDAC2P4-201ENST00000452925 711 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC108751.3-201ENST00000461814 1020 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 RN7SL188P-201ENST00000469842 285 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AP005403.1-201ENST00000579720 229 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AL162574.1-201ENST00000615702 950 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 RNA5SP132-201ENST00000364725 118 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 SNORD56.6-201ENST00000384569 71 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 RPL34P3-201ENST00000421454 338 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 OR5M14P-201ENST00000506803 618 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 SNORA43.3-201ENST00000517240 103 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 CYCSP22-201ENST00000517555 339 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AC108738.1-201ENST00000603703 237 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 AC114786.1-201ENST00000512892 1415 ntBASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
UPF3BQ9BZI7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC092681.1-201ENST00000297369 291 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 U3.7-201ENST00000363668 216 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 GPS2P1-201ENST00000411761 986 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 OR6D1P-201ENST00000436165 939 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 SUMO2P3-201ENST00000438311 288 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC005297.1-201ENST00000444765 862 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 SNRPCP3-201ENST00000474888 476 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 NDUFB5P1-201ENST00000508134 564 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC130364.2-201ENST00000528639 604 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AP001496.3-201ENST00000580230 913 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC018690.1-201ENST00000608144 626 ntBASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 AL360270.2-201ENST00000562952 5985 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms