Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 AL356317.1-201ENST00000396110 1436 ntBASIC8.13□□□□□ -1.11
SCAPERQ9BY12 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SCAPERQ9BY12 DDX39BP1-205ENST00000422507 192 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 RPL7P56-201ENST00000429441 717 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AL513533.1-201ENST00000453728 415 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 SLC25A51P1-201ENST00000468432 871 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 NDUFA5P9-201ENST00000472609 340 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC009597.2-201ENST00000604659 592 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC073365.1-203ENST00000641055 1992 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AL390879.1-201ENST00000439143 386 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 RN7SL385P-201ENST00000468873 276 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 ATP5LP5-201ENST00000483050 299 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 GTF2F2P1-201ENST00000511083 675 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 OR5AN2P-201ENST00000534535 896 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC137627.1-201ENST00000545761 289 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC011487.3-201ENST00000593607 453 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AP000769.2-201ENST00000602344 396 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AC021422.1-201ENST00000621212 473 ntBASIC8.12□□□□□ -1.11
SCAPERQ9BY12 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCAPERQ9BY12 AL353796.1-201ENST00000561542 3241 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 MIR105-1-201ENST00000385222 81 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AL121977.1-201ENST00000401636 979 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 NPM1P40-201ENST00000412758 733 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 COX6CP17-201ENST00000421389 185 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AL365220.1-201ENST00000432923 399 ntBASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCAPERQ9BY12 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC068870.1-201ENST00000563737 2455 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 U3.3-201ENST00000362986 216 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AL590399.4-201ENST00000436561 601 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC009963.2-201ENST00000453431 138 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 BTF3P13-201ENST00000513224 490 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC074050.1-201ENST00000563247 211 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 MIR4270-201ENST00000581799 70 ntBASIC8.1□□□□□ -1.11
SCAPERQ9BY12 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms