Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC122134.1-201ENST00000565664 1104 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.34□□□□□ -1.55
PKP2Q99959 FAM106CP-201ENST00000582212 507 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP2Q99959 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP2Q99959 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP2Q99959 SMIM12P1-201ENST00000603004 274 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 AC004241.3-201ENST00000611728 517 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.34□□□□□ -1.55
PKP2Q99959 AC111152.1-202ENST00000635848 339 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.34□□□□□ -1.55
PKP2Q99959 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PKP2Q99959 AC027088.4-201ENST00000611559 1947 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 AL034549.2-201ENST00000618285 3373 ntBASIC5.34□□□□□ -1.55
PKP2Q99959 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.34□□□□□ -1.55
PKP2Q99959 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PKP2Q99959 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PKP2Q99959 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.34□□□□□ -1.56
PKP2Q99959 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
PKP2Q99959 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PKP2Q99959 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 RNA5SP77-201ENST00000365394 120 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 AC104297.1-201ENST00000393779 870 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP2Q99959 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP2Q99959 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP2Q99959 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 TMEM183AP1-205ENST00000432739 290 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP2Q99959 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP2Q99959 AC104109.1-201ENST00000498563 436 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AK4P6-201ENST00000505168 528 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP2Q99959 SNORA48.9-201ENST00000516419 162 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP2Q99959 EIF4A2P5-201ENST00000529914 499 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC006512.2-201ENST00000543250 486 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 NMNAT1P5-201ENST00000559657 841 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP2Q99959 MIR4443-201ENST00000585052 53 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC063977.7-201ENST00000594454 337 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC009237.13-201ENST00000603193 276 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 RFPL4AP6-201ENST00000616792 846 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 MIR6721-201ENST00000617181 87 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC006213.5-201ENST00000619673 288 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC006840.1-201ENST00000623069 542 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC103798.2-201ENST00000624292 632 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP2Q99959 AL359715.3-201ENST00000569267 2123 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
PKP2Q99959 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PKP2Q99959 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP2Q99959 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PKP2Q99959 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKP2Q99959 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP2Q99959 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP2Q99959 HSPA8P14-201ENST00000552265 1805 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
PKP2Q99959 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP2Q99959 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP2Q99959 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PKP2Q99959 AC010132.2-201ENST00000295493 1043 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
PKP2Q99959 SNORA21-201ENST00000362423 132 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 RNU4-23P-201ENST00000362839 140 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP2Q99959 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PKP2Q99959 MIR130A-201ENST00000385274 89 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP2Q99959 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP2Q99959 UBE2V2P3-201ENST00000433562 437 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.32□□□□□ -1.56
PKP2Q99959 AL590004.3-202ENST00000445883 451 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 NPM1P19-201ENST00000450070 712 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP2Q99959 COX6B1P2-201ENST00000489624 230 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKP2Q99959 AC018797.1-201ENST00000510791 255 ntBASIC5.32□□□□□ -1.56
PKP2Q99959 CR383658.1-201ENST00000514609 734 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms