Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 RPL7AP61-201ENST00000443410 636 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 RPL7P41-201ENST00000485823 957 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 NXF4-202ENST00000416098 1465 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 U3.3-201ENST00000362986 216 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 CEACAMP7-201ENST00000444105 496 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 RPS3AP41-201ENST00000462701 778 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 AC093799.2-201ENST00000610062 578 ntBASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP2Q96SN8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 CCAT2-201ENST00000630920 1752 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AC103591.2-201ENST00000265259 766 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 RPS26P13-201ENST00000419030 330 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AC006427.1-201ENST00000514359 712 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 OR8Q1P-201ENST00000526467 655 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 MIR4646-201ENST00000580775 63 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AP000641.1-201ENST00000531988 1639 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 LINC02035-201ENST00000610128 5476 ntBASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDK5RAP2Q96SN8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC136624.1-201ENST00000400791 413 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AL158827.1-201ENST00000416300 391 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC124944.2-201ENST00000429866 1242 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 HNRNPCP1-201ENST00000556181 766 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 MIR4480-201ENST00000582492 71 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 MIR7703-201ENST00000620784 77 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC005618.4-201ENST00000625053 554 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC074101.1-201ENST00000637861 241 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AL161722.2-201ENST00000434731 981 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 VN1R54P-201ENST00000435210 1049 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 KNOP1P3-201ENST00000446933 426 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC004453.1-201ENST00000487895 408 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 HMGN1P9-201ENST00000515212 298 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 RN7SKP66-201ENST00000516681 231 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC087360.1-201ENST00000518788 616 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 OR4A17P-201ENST00000526032 904 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AL356608.1-201ENST00000610034 820 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 AC100827.5-201ENST00000615883 426 ntBASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP2Q96SN8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP2Q96SN8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP2Q96SN8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP2Q96SN8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP2Q96SN8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms