Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AL009179.1-201ENST00000406085 265 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RN7SKP229-201ENST00000410465 302 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RPSAP39-201ENST00000467439 883 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RPS17P15-201ENST00000475609 349 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC092709.1-201ENST00000521355 1045 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC022404.1-201ENST00000555320 273 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RN7SL290P-201ENST00000578661 300 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 SNORD95-201ENST00000579879 68 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC063977.5-201ENST00000601044 974 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC092944.2-201ENST00000605443 889 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RN7SL544P-201ENST00000617232 284 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RN7SL763P-201ENST00000620922 284 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 RNA5SP241-201ENST00000391326 114 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 HMGB1P20-201ENST00000402555 677 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 BX119904.3-201ENST00000428194 957 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 LRRC37A14P-201ENST00000452297 462 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 RN7SL583P-201ENST00000475692 287 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AL136038.1-201ENST00000497246 351 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 ASNSP4-201ENST00000511103 447 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 FRG1EP-201ENST00000634469 770 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 AL049767.1-202ENST00000637826 242 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf72Q96LT7 MT-RNR2-201ENST00000387347 1559 ntBASIC5.63□□□□□ -1.51
C9orf72Q96LT7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 MIR143-201ENST00000385300 106 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 PEX12P1-201ENST00000400284 1048 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 OR2AT2P-201ENST00000413438 905 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AL513325.1-201ENST00000417716 1034 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AL121776.1-201ENST00000429337 372 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC002504.1-201ENST00000438281 691 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC022215.1-201ENST00000481770 362 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 RPL7L1P4-201ENST00000513004 707 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 SCARNA21.2-201ENST00000516600 166 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AL359219.2-201ENST00000555184 348 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.62□□□□□ -1.51
C9orf72Q96LT7 AC087565.3-203ENST00000641018 837 ntBASIC5.62□□□□□ -1.51
C9orf72Q96LT7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms