Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL096711.1-201ENST00000404780 554 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 SNORA77.2-201ENST00000408571 112 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC245096.1-201ENST00000413104 546 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 RPS3AP44-201ENST00000425466 790 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 MTCYBP29-201ENST00000436327 1006 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC006326.1-201ENST00000445465 787 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC011853.1-201ENST00000518911 454 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AP003080.1-202ENST00000526526 915 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC092332.1-201ENST00000563684 829 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 OOSP1P2-201ENST00000579644 351 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 NBR2-204ENST00000587322 63 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC119403.2-201ENST00000590960 598 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 VN1R78P-201ENST00000597393 564 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC124856.1-201ENST00000600819 896 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL109653.1-201ENST00000603091 248 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AP002802.2-201ENST00000605877 235 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC107952.2-201ENST00000606048 486 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC021851.1-201ENST00000608537 1082 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL035461.2-201ENST00000619201 524 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL162377.2-201ENST00000624532 337 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC018765.1-201ENST00000623357 3446 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 HSPD1P9-201ENST00000420325 1636 ntBASIC5.92□□□□□ -1.46
VRK3Q8IV63 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VRK3Q8IV63 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VRK3Q8IV63 AC007159.1-201ENST00000566529 4706 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 MTCO1P28-201ENST00000574177 1528 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 HMGB1P13-201ENST00000406019 642 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC099535.1-201ENST00000408928 371 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 QRSL1P2-201ENST00000418582 964 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 RPL12P12-201ENST00000424633 501 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 RPSAP40-201ENST00000442343 891 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 SDC4P-201ENST00000453285 601 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL445687.2-201ENST00000458156 728 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 CTSLP6-201ENST00000458273 1002 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 RN7SL168P-201ENST00000463821 279 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 SYT14P1-201ENST00000481459 721 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC126121.1-201ENST00000482313 553 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC124945.1-201ENST00000485133 188 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 PPM1AP1-201ENST00000502740 1135 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC122718.2-201ENST00000505325 591 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 RN7SKP238-201ENST00000516483 249 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC134698.4-201ENST00000523451 826 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC087373.1-201ENST00000524920 491 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC026826.3-201ENST00000561747 158 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AP005119.1-201ENST00000580956 292 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms