Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 MIR1203-201ENST00000408812 85 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 RN7SKP279-201ENST00000411383 298 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 HMGN1P20-201ENST00000411849 300 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC023141.8-201ENST00000442554 208 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 IMPA1P1-201ENST00000510718 842 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC034236.3-201ENST00000605999 461 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC020763.5-201ENST00000623298 430 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 SNX18P12-201ENST00000624821 759 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC129915.3-201ENST00000634128 948 ntBASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP54Q7Z3B4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 ST13P16-201ENST00000401760 781 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 MIR1282-201ENST00000408865 101 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AL354890.1-201ENST00000413730 346 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC092651.1-201ENST00000426110 312 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 DEFA9P-201ENST00000433042 285 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 NPM1P18-201ENST00000434232 732 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AL589765.3-201ENST00000446084 462 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 CALM1P2-201ENST00000452941 448 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RNU1-88P-201ENST00000459274 128 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RPSAP39-201ENST00000467439 883 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC021205.1-201ENST00000468797 348 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC025181.1-201ENST00000477507 416 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC079080.1-201ENST00000479841 822 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 RN7SL809P-201ENST00000482040 297 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SNORA70.11-201ENST00000515987 138 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 SNORA70.13-201ENST00000516116 138 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 MIR2117-201ENST00000516780 80 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 IGHV3-63-201ENST00000518422 341 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC006530.1-201ENST00000555980 571 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 HNRNPCP1-201ENST00000556181 766 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 TXNP4-201ENST00000575018 310 ntBASIC5.41□□□□□ -1.54
NUP54Q7Z3B4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms