Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 RNA5SP435-201ENST00000364044 108 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC112492.2-201ENST00000432774 1030 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC069154.1-201ENST00000432914 542 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 BMS1P10-201ENST00000443754 1120 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 MTCO2P25-201ENST00000447065 681 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 RN7SL39P-201ENST00000462264 297 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 RN7SL187P-201ENST00000495587 303 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC104090.1-201ENST00000506341 1171 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 HNRNPKP5-201ENST00000515300 253 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 RNA5SP441-201ENST00000516809 88 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 OR11J2P-201ENST00000555298 907 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC092718.4-201ENST00000566639 716 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC002310.3-201ENST00000569728 723 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 MIR4502-201ENST00000580432 81 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AP000860.1-201ENST00000605250 559 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC068276.1-201ENST00000605793 379 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC092354.1-201ENST00000606057 376 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 ZNF849P-201ENST00000594711 1566 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL512310.3-201ENST00000547023 1335 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL929601.4-201ENST00000613011 1341 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 Y_RNA.192-201ENST00000363977 102 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 SNORA40.2-201ENST00000390847 128 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL359694.1-201ENST00000403247 604 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 OR2W4P-201ENST00000406496 926 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 FAT1P1-201ENST00000406588 507 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 MIR1302-11-201ENST00000408051 138 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 MIR1302-9-201ENST00000408365 138 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 MIR1302-10-201ENST00000408734 138 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 RANP6-201ENST00000413691 644 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL606490.7-201ENST00000433136 191 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC092427.1-201ENST00000439177 601 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 GAPDHP33-201ENST00000443168 1013 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC069439.1-201ENST00000494739 167 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC026898.1-201ENST00000586404 571 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC124916.2-201ENST00000604416 224 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC124312.5-201ENST00000604451 268 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 MIR1302-2-201ENST00000607096 138 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms