Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC121161.1-201ENST00000510606 652 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.12□□□□□ -1.59
EFNB3Q15768 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.12□□□□□ -1.59
EFNB3Q15768 PCNAP4-201ENST00000532690 730 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.12□□□□□ -1.59
EFNB3Q15768 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC025918.2-201ENST00000558683 763 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC007494.1-201ENST00000562293 760 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 ZNF322P1-201ENST00000568013 1209 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC027243.2-201ENST00000602530 724 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 AC008147.4-201ENST00000617570 1204 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC099654.9-201ENST00000637055 678 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC007382.1-201ENST00000624376 2618 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EFNB3Q15768 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EFNB3Q15768 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EFNB3Q15768 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
EFNB3Q15768 AC068870.3-201ENST00000625077 2536 ntBASIC5.12□□□□□ -1.59
EFNB3Q15768 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.11□□□□□ -1.59
EFNB3Q15768 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EFNB3Q15768 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.11□□□□□ -1.59
EFNB3Q15768 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.11□□□□□ -1.59
EFNB3Q15768 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AC093297.3-201ENST00000607056 2517 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EFNB3Q15768 OR52B3P-201ENST00000314715 928 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 RN7SKP269-201ENST00000365545 319 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EFNB3Q15768 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 MIR122-201ENST00000385044 85 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 MTATP6P31-201ENST00000406985 692 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 SNRPEP6-201ENST00000407465 277 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 RNU4-27P-201ENST00000410889 139 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.11□□□□□ -1.59
EFNB3Q15768 TATDN1P1-201ENST00000414123 891 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AL158050.1-201ENST00000416077 457 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 OR5W1P-201ENST00000423705 938 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AC073109.1-201ENST00000445066 978 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AL606517.1-201ENST00000446914 387 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AP006222.1-205ENST00000450734 457 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 NXT1P1-201ENST00000458481 316 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC104164.1-201ENST00000460282 590 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 RPL7P51-201ENST00000490532 749 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 PSMA2P2-201ENST00000504319 686 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC010460.2-201ENST00000509054 677 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC114781.3-201ENST00000512083 142 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 RNU5A-7P-201ENST00000515979 116 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 TPM3P3-201ENST00000521343 354 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 IGKV3D-34-201ENST00000522638 302 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 AC027026.1-201ENST00000532323 742 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 OR4A40P-201ENST00000533878 948 ntBASIC5.11□□□□□ -1.59
EFNB3Q15768 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EFNB3Q15768 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.11□□□□□ -1.59
EFNB3Q15768 AL356801.1-201ENST00000559320 294 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms