Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 EPS15P1-201ENST00000448836 336 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 PAXBP1P1-201ENST00000449315 447 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 RPL23AP35-201ENST00000451906 501 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AL390728.3-201ENST00000452704 270 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AL121769.1-201ENST00000469473 401 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 ACTG1P13-201ENST00000486987 1043 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC098799.2-201ENST00000509466 868 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 SUMO2P7-201ENST00000511179 285 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH1Q08174 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 OR8Q1P-201ENST00000526467 655 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 OR4C2P-201ENST00000530855 1064 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDH1Q08174 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 PPIAP14-201ENST00000577627 496 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 VN1R92P-201ENST00000598511 928 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 BNIP3P4-201ENST00000604946 565 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AC211433.3-201ENST00000623770 375 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AL157786.1-207ENST00000627771 695 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC139426.3-201ENST00000605648 2059 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 AL079343.1-201ENST00000572358 1771 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 Y_RNA.813-201ENST00000364639 102 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 MIR181A1-201ENST00000385026 110 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 MIR152-201ENST00000385212 87 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 EEF1GP6-201ENST00000402309 905 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 USP9YP6-201ENST00000413550 854 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH1Q08174 CDY14P-201ENST00000431260 1014 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 RPS25P9-201ENST00000435591 252 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 HMGB1P45-201ENST00000435986 653 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 BX005266.3-201ENST00000443013 1075 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 CYCSP44-201ENST00000448560 313 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDH1Q08174 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 CDY23P-201ENST00000451661 1014 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 USP9YP34-201ENST00000453983 808 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 RPS4XP12-201ENST00000461747 709 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 RN7SL145P-201ENST00000469955 296 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 RNU6-314P-201ENST00000516574 104 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH1Q08174 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 EIF5A2P1-201ENST00000564027 460 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AC096708.2-201ENST00000577676 512 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 MIR4528-201ENST00000577763 90 ntBASIC6.87□□□□□ -1.31
PCDH1Q08174 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH1Q08174 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDH1Q08174 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH1Q08174 AL139254.2-202ENST00000641937 1156 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms