Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 CDY17P-201ENST00000414121 1282 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 RPL34P3-201ENST00000421454 338 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC104843.2-201ENST00000427666 297 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AL389925.1-201ENST00000432257 728 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 SUMO2P3-201ENST00000438311 288 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 RN7SL72P-201ENST00000460697 269 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC092709.1-201ENST00000521355 1045 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC135626.1-201ENST00000556983 435 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC026124.2-201ENST00000621847 656 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 Z83820.1-201ENST00000456978 1499 ntBASIC5.23□□□□□ -1.57
HMGCS1Q01581 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 RNA5SP241-201ENST00000391326 114 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 GAPDHP42-201ENST00000406848 981 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 REREP1Y-201ENST00000422655 198 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 MRPS21P2-201ENST00000424704 264 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 FMO7P-201ENST00000436045 768 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 Z84478.1-201ENST00000438230 1219 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 REREP2Y-201ENST00000439103 200 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC064862.4-201ENST00000442180 334 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 HMGN1P36-201ENST00000446623 298 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 SNRPCP3-201ENST00000474888 476 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 PPIAP19-201ENST00000486414 492 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC026782.2-201ENST00000510845 636 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 MTATP6P1-201ENST00000514057 681 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 RBM22P12-201ENST00000567098 1255 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC016839.1-201ENST00000578162 867 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC012616.1-201ENST00000600294 197 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC244107.2-201ENST00000611773 76 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AC008115.3-201ENST00000614874 549 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AL118522.2-201ENST00000616045 615 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.22□□□□□ -1.57
HMGCS1Q01581 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HMGCS1Q01581 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS1Q01581 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HMGCS1Q01581 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HMGCS1Q01581 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.21□□□□□ -1.57
HMGCS1Q01581 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 MAPK10-328ENST00000641553 4009 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 TMSB4XP4-201ENST00000323496 618 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 RN7SKP28-201ENST00000364770 305 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS1Q01581 SDHDP6-201ENST00000414693 480 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC010740.1-201ENST00000417035 684 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 RPL7AP49-201ENST00000429522 581 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AL591438.1-201ENST00000433508 581 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AC019185.1-201ENST00000442718 389 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 AL161636.2-201ENST00000445179 927 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGCS1Q01581 LDHBP2-201ENST00000456969 1005 ntBASIC5.21□□□□□ -1.58
HMGCS1Q01581 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms