Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 GABARAPL3-201ENST00000412799 354 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 RPSAP35-201ENST00000413753 818 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.92□□□□□ -1.62
H3F3AP84243 AL390119.1-201ENST00000440329 312 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 AC091912.1-201ENST00000511351 248 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC111000.6-201ENST00000514471 709 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 RNU6-964P-201ENST00000516524 69 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 AC010245.2-201ENST00000606908 1167 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 FAM72A-208ENST00000607379 1139 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 AC104964.3-201ENST00000606115 2860 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 AC007938.2-201ENST00000604666 2634 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 AC144833.1-201ENST00000567953 4089 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 AC092681.1-201ENST00000297369 291 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 AL512422.1-201ENST00000407033 553 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 Z93019.1-201ENST00000416450 973 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 AC138761.5-201ENST00000433967 325 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 NDUFB4P8-201ENST00000435351 367 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 AC073465.2-201ENST00000440938 498 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 RPL5P25-201ENST00000441148 775 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 AL161722.1-201ENST00000446972 1032 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 AC016724.1-201ENST00000453215 421 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.91□□□□□ -1.62
H3F3AP84243 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.91□□□□□ -1.62
H3F3AP84243 RN7SL197P-201ENST00000466981 299 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 RPSAP39-201ENST00000467439 883 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 EIF1P7-201ENST00000487533 337 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.91□□□□□ -1.62
H3F3AP84243 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.91□□□□□ -1.62
H3F3AP84243 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.91□□□□□ -1.62
H3F3AP84243 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 SNORD95-201ENST00000579879 68 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.91□□□□□ -1.62
H3F3AP84243 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 AL589674.2-201ENST00000604304 337 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.91□□□□□ -1.62
H3F3AP84243 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H3F3AP84243 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.91□□□□□ -1.62
H3F3AP84243 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
H3F3AP84243 AC079097.1-201ENST00000512187 1399 ntBASIC4.91□□□□□ -1.62
H3F3AP84243 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3F3AP84243 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3F3AP84243 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
H3F3AP84243 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
H3F3AP84243 AC006484.1-201ENST00000435086 1884 ntBASIC4.9□□□□□ -1.62
H3F3AP84243 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
H3F3AP84243 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3F3AP84243 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.9□□□□□ -1.62
H3F3AP84243 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
H3F3AP84243 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
H3F3AP84243 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3F3AP84243 AL603750.1-201ENST00000624216 1717 ntBASIC4.9□□□□□ -1.62
H3F3AP84243 RNA5SP234-201ENST00000363916 119 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 MIR143-201ENST00000385300 106 ntBASIC4.9□□□□□ -1.63
H3F3AP84243 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H3F3AP84243 AL121878.1-201ENST00000418638 859 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms