Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HSPD1P9-201ENST00000420325 1636 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 ENSAP3-201ENST00000312710 333 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NKX6-1P78426 RNA5SP514-201ENST00000363717 111 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 RN7SKP296-201ENST00000411185 341 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 SLC20A1P1-201ENST00000413906 956 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC245452.2-201ENST00000435222 392 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.75□□□□□ -1.49
NKX6-1P78426 COL11A2P1-205ENST00000441798 676 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.75□□□□□ -1.49
NKX6-1P78426 RPL7P48-201ENST00000461513 746 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 RN7SL552P-201ENST00000462094 276 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC004263.1-201ENST00000479327 332 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC004815.1-201ENST00000484185 331 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC117395.1-201ENST00000487390 403 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC093664.1-201ENST00000511779 289 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 PRELID3BP4-201ENST00000515476 571 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 SNORA74.1-201ENST00000516320 180 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 IGLVIV-64-201ENST00000518581 301 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.75□□□□□ -1.49
NKX6-1P78426 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 OR52K3P-201ENST00000531655 943 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AL078601.3-201ENST00000573303 535 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC015802.2-201ENST00000589690 189 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 PCNAP1-202ENST00000595299 752 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 SMIM12P1-201ENST00000603004 274 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AL589743.6-201ENST00000611025 117 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AL138478.1-201ENST00000612252 832 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC079416.3-201ENST00000624479 549 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 MSL3P1-202ENST00000440028 1468 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NKX6-1P78426 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 SAMMSON-210ENST00000641260 1308 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC119674.1-204ENST00000641348 1343 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 DNM1P47-203ENST00000571780 12667 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 PPIAP24-201ENST00000328558 471 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NKX6-1P78426 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 RNA5SP333-201ENST00000363466 118 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 SNORA38B-201ENST00000363524 131 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 RNA5SP334-201ENST00000364825 118 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 MIR525-201ENST00000384978 85 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 HMGB3P7-201ENST00000400214 611 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 MIR541-201ENST00000401360 84 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AL049545.1-201ENST00000401856 572 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 OR2W4P-201ENST00000406496 926 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 LINC01881-201ENST00000416103 412 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 TAF13P2-201ENST00000416876 286 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC099782.1-201ENST00000425889 474 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC007679.3-201ENST00000434035 414 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 SETP8-201ENST00000435341 628 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 GAPDHP59-201ENST00000435908 267 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC110602.1-201ENST00000437414 318 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 RPL31P44-201ENST00000447680 377 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC004022.1-201ENST00000447766 1066 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms